Gemmata massiliana: SOIL9_12010
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Entry
SOIL9_12010 CDS
T06634
Name
(GenBank) valyl-trna synthetase : Valine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=valS PE=3 SV=1: tRNA-synt_1: Anticodon_1: Val_tRNA-synt_C
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gms
Gemmata massiliana
Pathway
gms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOIL9_12010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gms01007
]
SOIL9_12010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gms03016
]
SOIL9_12010
Enzymes [BR:
gms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
SOIL9_12010
Amino acid related enzymes [BR:
gms01007
]
Aminoacyl-tRNA synthetase
Class I (U)
SOIL9_12010
Transfer RNA biogenesis [BR:
gms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOIL9_12010
Prokaryotic type
SOIL9_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
Zn_ribbon_IS1595
DZR
HypA
Zn_ribbon_4
DUF7385
YnfU
Motif
Other DBs
NCBI-ProteinID:
VTR96513
UniProt:
A0A6P2D687
LinkDB
All DBs
Position
1:6935171..6938296
Genome browser
AA seq
1041 aa
AA seq
DB search
MATELPKAYDSKAAQEKWLTFWEERGYFHSKPDSTKKPFTIVIPPPNVTGALHMGHALNN
TLQDVLIRWRRMQGYNALWMPGTDHAGIATQSVVERLVFTQEKKTRHDLGRDELVKRIWE
WKDKYETRILGQLREMGASCDWSRTRFTLDPVCARAVRETFFRMFRDGYIYRGKRLVNWD
THLQTSVADDETYTEDTKSGFWTFKYAVDGAADTFISFSTTRPETMLGDTAVCVHPSDER
YKALIGKFVVQPHTGRKIPIIADGQLADPTLGTGCVKVTPAHDPNDYACWQRNLQVWAND
LHGGIINILNPDGTINENGGEYKGMDRYKAREAVTKKMEELGLYVEKADRIVPLKFSDRS
KTPIEPLLSDQWFVKMADRDDGKAGLAQMTMDAVTDGRVKFFPERYARSYLDWLGEKRDW
CISRQLWWGHRIPVWSDGCVDIRDMEEHIQRLQQDPALQAGAAAGDLVITKQSDEALARQ
YEEIRAKGTREALEEYRKIRRERPPHYVHVSLRVENPLHTERLVKHGFNQSDDVLDTWFS
SALWPHSTLGWPGPVLPEDKPGRVAPDWEKDRYYYPTSVLVTNRDIITLWVARMVLTGLY
NLNEIPFSHVYIHPKVMDGFGEGMSKTKGNGVDPLDIIDRYGTDAMRYGMVKLATETQDS
RLPVSNVCPHCGKEVPVKQEHMYMRTKKLACPECKQPFRPGGPWPTDDPELKTAKQGSDR
FEEGRNFANKMWNATRFLLMNLEGYTPGPVKLDELPTEDKWLLSRLATTTKAVTAALEGY
HFSDVARLLYDFVWSEFCDWYIEMSKGRLKDATARPLAQRVLAGVLDGILRLVQPVMPFV
AESLWQALNEAAPERGLPAPAKAEESVCIAHWPSYPELWISAEVEARFARMQDLVKSVRE
VRNRYQVDDKTRLDVSVKCSETVAADFNALAAFIGPLAGIATLTAGPTASKPKQAGGIVR
PEFEAYVSLAGLIDVAAEIKRLEKQIGDKRKSLDGTKAKLSNEKFVAGAPPEVVQQQRDL
VTDVEKQIAAMEENLKDLQSA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgaactcccgaaggcatacgactcgaaagcggcccaagagaagtggctcacg
ttctgggaggaacgcggctacttccacagcaagccggattcgaccaagaagccgttcacc
atcgtaatcccgccgccgaacgtgaccggcgcacttcacatgggccacgcgctcaacaac
acgctccaggacgtgctgattcgctggcgccggatgcagggttacaacgcgctctggatg
cccggcacggaccacgccgggatcgccacgcaatccgtggtggagcggctcgtgtttacc
caggagaagaaaacccggcacgacctggggcgcgacgaactggtgaaacgcatttgggag
tggaaggacaagtacgagacgcgcattctcggccaactccgcgaaatgggcgcgagctgc
gactggagccgaacgcggttcacgctcgatccggtgtgcgcccgggccgtgcgcgagacg
ttcttccgcatgttccgcgacggctacatctaccgtggcaagcggttggtgaactgggac
acgcacctgcaaacgtccgtggccgacgacgagacatacaccgaagacaccaagagcggc
ttttggacgttcaagtacgccgtggacggtgcagccgataccttcatctcgttcagcacc
acgcgacccgagacgatgctcggcgacaccgcggtgtgcgtgcatcccagcgacgagcgg
tacaaggcgctcatcggcaagttcgtggtgcagccgcacaccgggcgcaagatcccgatc
atcgctgacggccaactcgcggacccgacgctcggcacgggctgcgtgaaggtgacgccc
gcgcacgacccgaacgactatgcctgctggcagcgcaacctccaggtgtgggccaacgat
ctccacggcggcatcattaacatcctgaaccccgatggcacgattaacgagaacggcggc
gaatataagggcatggaccgctacaaggcccgcgaagccgtgacgaagaagatggaggaa
ctcggcctctatgtggagaaagcggatcgtatcgtgccgctgaaattcagcgaccgaagc
aagacgcccatcgagccgctgctgtcggaccagtggttcgtgaagatggccgaccgcgac
gacggcaaggccggccttgcacagatgacaatggacgcggtgaccgatggccgcgtgaaa
ttcttcccggagcgctacgcgcgctcgtacctcgactggctcggcgaaaaacgcgattgg
tgcatcagccggcaactgtggtggggacaccgtattccggtgtggtcggatggctgcgtg
gacatccgcgatatggaagagcacatccaacgccttcaacaagatccagctttgcaggct
ggcgcggcggcgggagacttagtaatcacaaagcaaagcgacgaggcactggcaagacag
tacgaggagattcgcgctaaaggcactcgcgaagcgctcgaagagtatcgcaagattaga
cgagaacggccacctcactacgtgcatgtgtcgttgcgtgtagaaaaccccttacacacg
gaacgattagtaaagcacggtttcaaccaatcggatgatgtactcgacacgtggttttca
tccgcactgtggccgcattcgacgctcggctggcccggcccggtgttgccggaagataag
ccggggcgcgtggcgcccgactgggagaaggaccgctactactaccccacatcggtgctg
gtgaccaaccgtgacatcatcacgctgtgggtggcgcggatggtgctgacggggttgtac
aacctgaacgagatcccgttcagtcacgtgtacatccaccccaaagtgatggatggcttc
ggcgagggcatgagcaagacgaagggtaacggggtggacccgctcgacatcattgaccgc
tacggcaccgacgcgatgcgctacggcatggtgaagctcgccaccgaaacgcaggactcg
cggttgccggtgtcgaacgtgtgcccgcactgcggcaaggaagtgccggtgaagcaagag
catatgtacatgcggacgaaaaagctcgcctgcccggagtgcaagcagccgttccgcccg
ggcgggccgtggccgactgacgatccggaactgaagactgcgaagcagggttccgaccgc
ttcgaggagggccggaacttcgccaacaagatgtggaacgcgacgcggttcctgctcatg
aacctggaaggctacacgccaggcccggtgaagctcgacgagttgcccacggaagacaag
tggttgctctcgcggctcgcgaccaccacgaaagccgtgactgccgcgctggagggttac
cacttcagtgacgtggcccggctgctctacgacttcgtgtggagcgagttctgcgactgg
tacatcgagatgtcgaaggggcgcctgaaagatgccaccgcgcgcccgctcgcgcagcgc
gtgctcgccggggtactcgacggtatcctgcggctggtgcagccggtgatgccgttcgtg
gcggaatcgctgtggcaagcactcaatgaagccgctcccgagcgtggcctcccggcgccc
gccaaggccgaagagagcgtgtgcatcgcacactggccgagctaccccgagttgtggatc
agtgccgaagtggaagcccgcttcgcgcggatgcaggatctcgtgaagagcgtgcgcgag
gtgcgcaaccgctaccaggtggacgacaagacgcgcctcgacgtgtcggtgaagtgttct
gaaactgtggccgccgatttcaacgcgctcgcggcgttcatcgggccgctcgcggggatc
gcgactctcaccgccggcccgaccgcgtccaagccgaagcaggccggcggcatcgtgcgg
cccgagttcgaggcttacgtttcgctcgccgggctgatcgacgtggccgccgagatcaag
cgcctcgaaaagcagatcggcgacaagcggaagtcactcgacggcacgaaggcgaagctc
tcgaacgagaagttcgtggccggtgccccgccggaggtggtgcagcagcagcgcgatttg
gtgaccgatgtcgagaagcaaatcgccgcgatggaagagaacttgaaggacttgcaatcg
gcctga
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