Gemmata massiliana: SOIL9_12210
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Entry
SOIL9_12210 CDS
T06634
Name
(GenBank) trna pseudouridine synthase b : tRNA pseudouridine synthase B OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=truB PE=3 SV=1: TruB_N: TruB-C_2
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gms03016
]
SOIL9_12210
Enzymes [BR:
gms01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SOIL9_12210
Transfer RNA biogenesis [BR:
gms03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SOIL9_12210
Prokaryotic type
SOIL9_12210
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
VTR96493
UniProt:
A0A6P2D669
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All DBs
Position
1:complement(6912719..6913585)
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AA seq
288 aa
AA seq
DB search
MNGLLVIDKPGGMTSRDAVNRVQRWFPRKTKIGHTGTLDPLATGVLVVCIGAATRLADYV
QAMGKSYSSRFRFGATSTTDDADGEVTETPNAPVPTREQIDAALAAFVGNVEQVPPAVSA
LKLDGVRAHELVRRGLGPKLNARVVSIYAIRVTGFAWPHLDVEVDCGKGTYIRSIARDLG
DVLGCGGLVQTLRRTRVGPFRVEQGMSLDADPASVKLLPMAEAVAGMKHVSLNADEVIRL
RHGQRIRLSENNAPPEGEELAVFDGQTGLIGIGVVERGQLKPQLVFGV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtcttttggtgatcgataagccgggcggaatgacctcgcgcgacgccgtgaac
cgcgttcagcgctggttcccgcggaagacgaagatcgggcacaccggcacgctcgacccg
ctcgcgacgggcgtgctcgtggtgtgcatcggcgccgcgacgcgcctggcggactacgtt
caggcgatggggaagagttattcgtcgcgcttccgattcggtgcgacaagtactacggac
gacgcggacggcgaagtcacggaaaccccgaacgcgcccgtccccacgcgcgaacagatc
gacgcggcactcgcggcgttcgtcgggaacgtggagcaggttccgccggccgtgtccgcg
ctgaagctcgacggcgtccgcgcacacgagttggtgcgccggggactggggccgaaactg
aacgcccgcgtggtatcgatctacgcgatccgcgtgacgggctttgcgtggccgcatctc
gatgttgaagtggattgcgggaaggggacgtacattcgctccatcgcgcgcgatctcggc
gacgtgctcgggtgcggtgggctcgtacaaacgctccggcgcacgcgggtcggtccgttc
cgagtcgaacaggggatgagcctggacgcggaccccgcgagtgtgaaactgctcccaatg
gcggaagcagtcgcggggatgaagcacgtttccctgaacgcggacgaagtgatccgactg
cgccacggtcagcgtattcgattgtctgagaacaatgccccgcccgagggcgaggagttg
gccgtgttcgatggccaaacggggttgatcggcattggcgtcgtcgagcgcgggcaactc
aagcctcaactcgtgttcggggtttga
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