Gemmata massiliana: SOIL9_13680
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Entry
SOIL9_13680 CDS
T06634
Name
(GenBank) succinate dehydrogenase : Succinate dehydrogenase subunit A OS=Koribacter versatilis (strain Ellin345) GN=Acid345_1384 PE=4 SV=1: FAD_binding_2: Succ_DH_flav_C
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
gms
Gemmata massiliana
Pathway
gms00020
Citrate cycle (TCA cycle)
gms00190
Oxidative phosphorylation
gms00650
Butanoate metabolism
gms00720
Other carbon fixation pathways
gms01100
Metabolic pathways
gms01110
Biosynthesis of secondary metabolites
gms01120
Microbial metabolism in diverse environments
gms01200
Carbon metabolism
Module
gms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gms_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gms_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SOIL9_13680
00650 Butanoate metabolism
SOIL9_13680
09102 Energy metabolism
00190 Oxidative phosphorylation
SOIL9_13680
00720 Other carbon fixation pathways
SOIL9_13680
Enzymes [BR:
gms01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SOIL9_13680
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
FAD_oxidored
FAD_binding_3
GIDA
Thi4
Pyr_redox_3
Lycopene_cycl
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
VTR96346
UniProt:
A0A6P2D790
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Position
1:6739173..6741038
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AA seq
621 aa
AA seq
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MSVEFQTHEHDVVVIGAGGAGLRAAIEASAAGVSVGLVCKSLLGKAHTVMAEGGIAAALA
NVDNRDNWKVHFADTMRGGQYVNNWRMAELHAREAPDRVRELEKWGAVFDRTPDGKILQR
NFGGHKYPRLAHVGDRTGLELIRTLQDHGIHRGISVYMERTVIRLLKDGDRVAGALAYDR
ERGRWTVFRAKAIVLATGGIGKAYKITSNSWEYTGDGHTLAYDAGAELIDMEFVQFHPTG
MVWPPSVRGILVTEGVRGEGGVLRNNTGNRFMFGDIPDNYRPQTAKDEEEGFRYVLGDKE
ANRPPELLTRDHVARCIVREVREGRGSPHGGVFLELQTFAEWYGKRAKKFDAAEHWKKKL
PSMYHQFKELGGLDITKEPMEVGPTTHYMMGGVRVDADTQMSRVPGLFACGECAAGINGA
NRLGGNSLSDLLVLGKRAGEFAAKYAREQSSAGAVPTDQVDAAAKWALEPFDRDVSENPF
KVQQDLQDMMQDLVGIVRKEDEMLRALDGLEKLRARAAKVQVTGNREYNPGWHTAMDLHN
LLTVSEAVTRAAILRKESRGAQFRDDYPKKDNAKFGKVNSIIAKGTDGTMQIRLEQIPPM
PDELKDAIRAEANGVLPDELK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgagttccagactcacgaacacgacgtggtcgtcatcggggccgggggcgcg
gggctccgggccgcgatcgaggcgagcgcggccggcgtgtcggtcgggttggtgtgcaaa
tcactgctcggcaaagctcacaccgtgatggccgagggcgggattgcagcggcgctcgcg
aacgtcgataaccgcgacaactggaaggtccacttcgccgacacgatgcgcggcgggcag
tacgtcaacaactggcgcatggccgaacttcacgcgcgcgaggccccggaccgcgtgcgc
gaactcgaaaagtggggcgcggtgttcgaccgcacgcccgacggcaaaattctgcaacgg
aacttcggcgggcacaagtacccgcgcctcgcgcacgtcggcgaccgcaccgggctcgaa
ctcatccgcacgctccaggaccacggcatccaccggggcatctcggtgtacatggagcgc
accgtcattcggctcctgaaggacggcgaccgggtcgcgggcgcgctggcctacgaccgt
gagcgcgggcgatggaccgtgttccgcgcgaaagccatcgtgctcgcgaccggcggcatc
gggaaggcgtacaagatcacgtcgaactcgtgggagtacaccggcgacgggcacacgctc
gcctacgacgcgggcgcggaactcatcgacatggagttcgtgcagttccacccgacggga
atggtgtggccgccgagcgtgcgcggcatcctggtcaccgagggcgtgcgcggcgagggc
ggggtactgcggaacaatacgggcaaccggttcatgttcggcgacatcccggacaattac
cgcccccaaaccgcgaaggacgaagaagaaggcttccgctacgtgctcggcgacaaggag
gccaaccgcccgccggaactactcacgcgcgatcacgtggcgcggtgcatcgtgcgtgag
gtgcgtgaggggcgcgggagcccgcacgggggcgtgttcctcgagttgcaaacgttcgcc
gagtggtacggcaagcgcgcgaagaagttcgacgcggccgagcactggaagaagaaattg
ccgagcatgtaccaccagttcaaggaactcggcggcttggacatcacgaaggagccgatg
gaagtcgggccgacgacgcactacatgatgggcggcgtccgcgtcgacgcggacacgcag
atgtcgcgcgtccccgggctgttcgcgtgcggcgagtgcgcggccggcatcaacggcgcg
aaccgcctgggcgggaactcgctttccgacttactcgtgctcggcaagcgcgcgggggaa
ttcgcggcgaaatacgctcgcgagcaaagttccgcgggagccgttcccaccgatcaggtc
gatgcggctgcgaaatgggcactggagccattcgatcgtgatgtatcggagaacccgttc
aaggttcagcaggacttacaggacatgatgcaagacctcgtcgggatcgtgcggaaggaa
gacgagatgctgcgcgccctcgacgggctggaaaagctccgcgcccgcgccgcgaaggtc
caggtcacggggaaccgcgagtacaaccccggctggcacaccgcgatggaccttcacaac
ctcttgaccgtttccgaagccgtgacgcgcgccgcaatcctacgcaaagagagccgcggg
gcacagttccgcgacgattatccgaagaaggataacgcgaaattcgggaaggtgaacagc
atcatcgcaaaaggtaccgacggcacgatgcagatccgcctggaacagattccgcccatg
cccgacgagctgaaagacgccatccgcgcggaagcgaacggtgtgcttccggacgagctg
aaatga
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