Gemmata massiliana: SOIL9_15540
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Entry
SOIL9_15540 CDS
T06634
Name
(GenBank) mechanosensitive ion channel : MscS Mechanosensitive ion channel OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3813 PE=4 SV=1: MS_channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gms02000
]
SOIL9_15540
Transporters [BR:
gms02000
]
Other transporters
Pores ion channels [TC:
1
]
SOIL9_15540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
UPF0242
MS_channel_1st
CENP-F_leu_zip
Exonuc_VII_L
CCDC39
Occludin_ELL
HMMR_N
ATG16
CCDC22_CC
Motif
Other DBs
NCBI-ProteinID:
VTR96160
UniProt:
A0A6P2D9J9
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All DBs
Position
1:complement(6487835..6489874)
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AA seq
679 aa
AA seq
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MHRIHFSRGLSLLVCCAGLQLLFAARGQADGQPPPGPAPGTAQKLQATDAEKIANTRDSI
KQATTALEKLQKRLVDPDSEYARAETEFETLNGKLKAVKTAVAKFRKDQKEAEAVALEAA
LPALQDDWQLAKDRFDIAIRQRKVTLETIDDLKRRIESDTQLLDRLEGRAQPRPSMSPPV
SGGKPSDPVPAVPPKTEAKPAVDVPPAITLPGGPGAPVAAPADTAGASVGQSSAPDENDQ
TVRQARELLSTRRNELREVEARVRAADERMRIMERAIRNIEKTLGLEQEAAAQAEKAVAK
LSGAKIPEDPVERAAHTRRGTEAATRLAESRERIQRITDRIASLNENLEGLKAERDVVSQ
EAEQKQQQVSAAEADLNALLNPASTRNLFRWVLAKGPHVLLILAGMFVAHLVARQFSHHI
VRFITRNSHRGSSGDRENRASTLVGVFRYAVGLVVFGGGVVMILDEIGVPIVPLMGGAAV
LGLAVAFGAQNLIRDYFTGFMMLMEDQYSVNDVVKIGAISGLVELITLRMTVLRDLEGVR
HFIPHGTVTSVSNLTHGWSRAMIDVPVGYKENVDRVIDVLMDLSREMRLDPVLGEHILED
AEMLGVDALSDSGAVVRFLLKTRPLKQWPVKREMLRRIKNRFDELGIEIPFPRRTVYHRF
PEGTAGAPTLARESERNAA
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaatacacttctcgcgcgggctgtcgcttcttgtgtgctgcgccggcttgcaa
ttgttgttcgccgctcggggccaggcggacgggcaaccgcctcccggtcccgcgccgggc
acggcgcagaagctccaggcgaccgatgcggagaaaatcgccaacacgcgcgactccatc
aagcaggcgaccacggccctggagaagctccagaagcggctcgtcgatcccgatagcgag
tacgcgagggccgagacggaatttgaaacgctcaacggtaaactgaaagccgtgaagacg
gcagtggcgaagttccgcaaggaccagaaggaagccgaagccgtcgcgctcgaagcggcg
ctcccggcactccaggacgactggcagctcgccaaggatcgtttcgatatcgcgatccgg
cagagaaaagtgaccctggaaacgatcgacgacctgaagcgccggatcgaatcggacacg
cagctcctggatcggctcgaggggagagctcaaccgcgccccagtatgtcgcccccggtg
tcgggagggaagccgtcggacccggtcccggctgtgcctccgaagaccgaggcgaaaccg
gcggtggacgtgcccccggcaataaccctaccggggggccccggggcgccggtggcggca
ccggccgacactgctggcgcttcggtcggtcagtcctcggcgcccgacgagaacgaccag
accgtgcggcaggcccgcgagttgctcagtacgcgccgcaacgagttgcgcgaggtcgaa
gcccgtgtgcgcgcggccgacgagcgcatgcggatcatggagcgcgcgatccggaacatc
gagaagacactggggctcgaacaggaagcggccgcccaagccgagaaagcggtcgcgaag
ctctcgggggccaagatccccgaagacccggtcgaacgggccgcccacacccgaaggggg
acggaggccgcgactcgcctggccgagtcccgcgaacggatccagaggatcacggaccgg
atcgcctcattgaacgagaacctcgagggtttgaaagcggagcgcgacgtcgtctcgcag
gaggcggaacagaaacagcagcaggtgagcgcggccgaggcggacctgaacgcgctgctc
aaccccgcgtccacgcgcaatctgttccggtgggtgctcgccaaagggccgcacgtactg
ctgatcctcgcggggatgttcgtggcacacctcgtggcgcgccagttcagtcaccacatc
gtccggttcatcacccggaacagccaccgcggttcgtcgggggaccgggagaaccgggcc
agcacgctggtcggggtgttccggtacgcggtcgggctcgtggtcttcgggggcggggtc
gtgatgatcctcgacgagatcggggtgccgatcgtcccgctcatgggcggggccgcggtc
ctcggtctggccgtcgcgttcggggctcagaacctgatccgggactacttcaccggcttc
atgatgctgatggaggaccagtatagtgtcaacgacgtcgtgaagatcggggcgatctcg
gggctcgtcgagctgatcacgctgcgcatgaccgtcctgcgcgacctggagggcgtgcgc
cacttcatcccgcacggcacggtcaccagcgtcagcaacctgacgcacgggtggtcccgg
gcgatgatcgacgtgccggtcgggtacaaggagaacgtggaccgggtcatcgacgtgctc
atggacctgtcccgggagatgcgcctggacccggttctcggcgagcacatcctggaagac
gcagaaatgctcggggtggacgcgctctcggattccggggccgtggtccgtttcctcctc
aagacgcgcccgctcaagcagtggccggtcaagcgggagatgctgcgccggatcaagaac
cggttcgacgaactcggcatcgagatcccgttcccgcgccgcaccgtgtatcaccggttc
ccagagggcaccgccggtgccccgaccctcgcgcgcgagagcgagcggaacgcggcttga
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