Gemmata massiliana: SOIL9_18640
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Entry
SOIL9_18640 CDS
T06634
Name
(GenBank) Ribonuclease Z OS=Chthoniobacter flavus Ellin428 GN=CfE428DRAFT_3369 PE=4 SV=1: Lactamase_B_2
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gms03016
]
SOIL9_18640
Enzymes [BR:
gms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SOIL9_18640
Transfer RNA biogenesis [BR:
gms03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SOIL9_18640
Prokaryotic type
SOIL9_18640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
VTR95850
UniProt:
A0A6P2D8N3
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All DBs
Position
1:complement(6140433..6141440)
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AA seq
335 aa
AA seq
DB search
MPLTFQVLGQPEQDNALFVKVDTGQAQTRLLFDCGDGCPHQLGPSDLREVDHLCFSHLHM
DHIAGFDLFFRLNFDRTTKENRIWVPHGSVEVIQHRFRGFMWNLVDEKQEGEWFVSEIGP
NTVREGRFLAKEGFRTAHTVPERPRQGRTVIEGEGFTVEAMLLDHGTPSVGYLVREMDRV
NVDTEKLAAKGLKPGPWVKRLRGPSAAPGETVEIDGVSHSLVALQTELLVTTPGDSIAYL
TDFRMTPTTADALVSWLRGVNTVVCESQYRAADSDLAEPVMHSTTEEVTLMASRAGIGRL
ILFHFSGRYDAIARREMLADARAVFANTTFPDGWV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcacgttccaagttctcggtcaacccgaacaagacaacgcgctgtttgtgaaa
gtggacacggggcaggcgcaaacgcggcttttgttcgattgcggcgatgggtgcccgcat
caactcggcccgtccgacttgcgcgaagtcgaccacctgtgcttctcgcacttgcacatg
gatcacatcgcgggcttcgatctattcttccggctgaacttcgaccgcaccacaaaagag
aaccgcatctgggtgccgcacggcagcgtcgaggtgattcagcaccggttccgcgggttc
atgtggaacctggtggacgagaagcaggagggtgagtggttcgtttccgagatcgggccg
aacacggtgcgcgagggccgatttctcgccaaagaaggcttccggactgctcacacggtg
cccgaacgcccgcgccaggggcggaccgtgattgagggcgaaggtttcacggtcgaggcc
atgttactcgatcacggcaccccttcggtggggtacttggtgcgcgaaatggatcgcgtg
aacgtggatacagagaagttggccgcgaaggggttgaaacccgggccgtgggtgaaacgc
cttcgcggtccgagtgctgcgccgggtgaaaccgtcgaaattgacggcgtttctcattcg
cttgtcgcgctgcagaccgaactgctcgttaccactccgggcgattcgatcgcgtacctg
accgacttccgcatgacccccacgaccgcggacgcgctcgtgtcgtggttacgcggggtg
aacacagtggtgtgcgagagtcagtaccgagccgccgattcagacctcgccgaacctgtg
atgcactccaccacagaggaagtcacacttatggcgtcgcgggccggcattggtcggttg
atcctgtttcacttctcgggtcggtacgacgcgatcgcgcgccgggagatgctcgccgat
gcccgcgccgttttcgcgaacacgacgtttccggacggatgggtgtag
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