Gemmata massiliana: SOIL9_18680
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Entry
SOIL9_18680 CDS
T06634
Name
(GenBank) Periplasmic binding protein domain protein OS=Gemmatimonadetes bacterium KBS708 GN=J421_5609 PE=4 SV=1: Peripla_BP_4
KO
K10439
ribose transport system substrate-binding protein
Organism
gms
Gemmata massiliana
Pathway
gms02010
ABC transporters
gms02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SOIL9_18680
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
SOIL9_18680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gms02000
]
SOIL9_18680
Transporters [BR:
gms02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
SOIL9_18680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
VTR95846
UniProt:
A0A6P2D5U7
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All DBs
Position
1:complement(6137539..6138585)
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AA seq
348 aa
AA seq
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MPRLLYYLLAAALPVLFGCQKPEEQFTVVVIPKGLTHEHWQSVRRGAERCADDLRAEDGT
TVRIIFDGPLRERDAIEQIRIVDRRVATGASGIVLAPQHSRTMTACVKRAADAGVPVVII
DSGLDDPDHFVKYVATDNYNGGCLAARHLIGELKKQGKGKPKLILFRYAVGSQATEDRER
GFEETVKKICPDAVWLSTDKYAGATRDSAMREAGPLILQFGNQVDGIFAPNESSASGTAD
VLRSQGLNKKVLLMGFDASKPLLQSIQEGDVIGSILQDPYRMGYLSTWYCVRYLRGRDVS
NGRKDMSESTGEYLVTKENLNSVFTLGLYDPETQAKRTTEELRKGPKR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtctgctttattacctgctcgccgccgcgctgccggtcctgttcgggtgccag
aaacccgaggaacagttcaccgtcgtcgtcatcccgaaggggctgacgcacgagcactgg
cagtcggtgcgccgcggggccgagcgctgcgcggacgatctgagggccgaagacggcacc
acggtgcgaatcattttcgacggcccgctgcgcgagcgcgacgcgatcgaacagatccgg
atcgtcgaccggcgcgtggcgaccggcgcgagcggtatcgtgctcgccccgcagcacagc
cgcactatgaccgcctgcgtgaaacgcgcggctgacgcgggcgtgcccgttgtcatcatc
gactccggactcgatgatcccgatcacttcgtcaagtacgtcgcgaccgacaactacaac
ggcgggtgcctcgccgcccgtcacctcatcggggaactcaaaaagcaggggaaaggcaag
ccaaaactgatcctgttccgctacgcggtcggttcgcaagccacggaggaccgcgagcgg
ggctttgaagagacggtgaagaaaatctgcccggacgcggtctggctctcgacggacaag
tacgctggggcgacacgtgattccgcgatgcgcgaagcggggccactcatccttcagttc
ggcaaccaggtggacgggatcttcgcaccgaacgaatcgtccgcgtccggcacggccgac
gtgttgcgctcgcaggggctgaacaagaaagtgctcctgatggggttcgacgcgagcaag
ccgctgctgcaatccatccaggaaggtgacgtgatcggcagcattttgcaagacccgtac
cgcatgggatacctgtcaacttggtactgcgtgcggtacctgcgtgggcgtgatgtgagc
aacgggcggaaggacatgagcgagagcaccggtgagtacctcgtcacgaaggagaacctc
aattcggtgttcacgctcgggctgtacgaccccgaaacgcaggccaagcgcaccaccgaa
gaactgcggaaggggccgaagcgatga
DBGET
integrated database retrieval system
