Gemmata massiliana: SOIL9_19860
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Entry
SOIL9_19860 CDS
T06634
Name
(GenBank) trna-u20-dihydrouridine synthase : tRNA-dihydrouridine synthase OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1782 PE=3 SV=1: Dus
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gms03016
]
SOIL9_19860
Transfer RNA biogenesis [BR:
gms03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
SOIL9_19860
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Gene cluster
GFIT
Motif
Pfam:
Dus
PEP_mutase
MR_MLE_C
Motif
Other DBs
NCBI-ProteinID:
VTR95728
UniProt:
A0A6P2D349
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All DBs
Position
1:5988699..5989805
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AA seq
368 aa
AA seq
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MTNANAELPPPPAQYREPVSIGTIKLASRFNLAPLAGYTNLPFRLSVRELGGVGLCTTDL
VNARAIVDGIQKTMILLATDPAERPLFVQIFGSKAHEMAGAAKWLVERKLADGIDINMGC
PVRKVVKTGGGSSMMCDTTGATVDLVRQVVEAVPVPVSVKMRLGWDDDNLSAPYFAREFE
KVGVAALTIHGRTREQGFSGGVNHDGIRRVVEAVERIPVFGNGDVRSVWDAARMIADTGC
HGIAMGRGALANPWIFRQFDSWVRTGDPGPRGTYAERLAFMRLHLRRLVDWKGSEKNGCV
HFRKVATWYTKALRFPKRVQQQLVMLSGLDEFEAIIAPFASGSAPEGWTEYDSQQAHIAV
PAGPIAHW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcgaacgccgaacttcccccgccgcccgcccagtaccgcgagccggtgtct
attgggacaatcaaactcgcctcgcggttcaacctcgcgccgctcgcggggtacacgaat
cttccgttccgcctgtccgttcgtgaactcggaggagtcgggctttgcaccaccgacctc
gtcaatgcccgcgcgatcgttgatggcattcagaagacgatgattctgctcgccacggac
ccggccgagcgcccactgttcgtgcagatcttcggctccaaggcccacgaaatggccggc
gccgcgaagtggctcgtcgagcgcaagctcgccgacggcatcgacatcaacatgggctgc
ccggtgcggaaggtcgtgaagaccggcggcgggtcgtccatgatgtgcgacaccaccggc
gcgaccgtggatctcgtccggcaggtagtcgaagccgtgccggttcccgtgagcgtgaaa
atgcgcctgggctgggacgacgacaacctgagtgccccgtacttcgcgcgcgagttcgag
aaggtcggcgtcgcggcactcaccattcacggccgaacgcgcgaacagggcttttcgggc
ggcgtgaatcacgacggcatccggcgcgtcgtggaggcggtcgagcgcatcccggtgttc
ggcaacggcgacgtgcgttcggtgtgggacgcggcccggatgatcgccgataccggctgc
cacggcatcgcgatggggcgcggcgcactcgcgaacccgtggatattccgccagttcgat
tcgtgggtgcgaacgggcgatcccggtccgcgcggaacttatgcggagcgcctcgcgttc
atgcggctccacctgcgccggctcgtggattggaagggaagcgagaagaacggctgcgtg
catttccgcaaggtcgcgacgtggtacacgaaggcgctccggttcccgaagcgcgttcag
cagcagctcgtgatgctctcggggctagacgagttcgaggcgatcatcgcgccgttcgcg
tccggttcggcgcccgagggctggaccgaatacgactcccaacaggcacacatcgcggtc
cccgccgggccgatcgcgcactggtag
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