Gemmata massiliana: SOIL9_22530
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Entry
SOIL9_22530 CDS
T06634
Name
(GenBank) carbamoyl phosphate synthase large subunit : Carbamoyl-phosphate synthase (glutamine-hydrolyzing) OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1525 PE=3 SV=1: CPSase_L_chain: CPSase_L_D2: CPSase_L_D3: CPSase_L_chain: CPSase_L_D2: MGS
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
gms
Gemmata massiliana
Pathway
gms00220
Arginine biosynthesis
gms00240
Pyrimidine metabolism
gms00250
Alanine, aspartate and glutamate metabolism
gms01100
Metabolic pathways
gms01110
Biosynthesis of secondary metabolites
gms01240
Biosynthesis of cofactors
Module
gms_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SOIL9_22530
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SOIL9_22530
00220 Arginine biosynthesis
SOIL9_22530
Enzymes [BR:
gms01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
SOIL9_22530
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
ATPgrasp_Ter
RimK
ATP-grasp_2
ATP-grasp_5
Methyltransf_3
Isochorismatase
Motif
Other DBs
NCBI-ProteinID:
VTR95461
UniProt:
A0A6P2D2E3
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Position
1:complement(5639214..5642531)
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AA seq
1105 aa
AA seq
DB search
MPKRTDIKKILLIGSGPIIIGQACEFDYSGTQACKALREEGYSVVLVNSNPATIMTDPET
ADRTYIEPITWEVVEKIIVAERPDALLPTLGGQTALNTAMDLFKKGVLAKHGVEMIGANA
DVIDKAEDRQRFKDAMLKIGVSVPKSVVVHSLEEAMRAVEEVGLPCVLRPSFTMGGTGGG
IAYNRDEYRDLITHGLQLSPTTEVLVEESVIGWKEYELEVMRDRADNVVIICSIENLDPM
GVHTGDSITVAPAQTLSDKEYQRMRDKAKDIIREIGVETGGSNIQFAINPADGRMIAIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITRETPACFEPTIDYVVTKVPR
FAFEKFPEANPTLTTQMKSVGETMAIGRTFKESLQKALRGLEVNRFGLGCDKRDRWGTAN
PPAREEITFKLSSPNAERVWYLRYAFLAGMSLDEIHQRTKIDPWFLRGVEDLVNIEHELR
AVGSLDKVTPELMLKAKQSGFIDRQLAHIWNVAEAEVRKLRKSFGIEAVFKSVDTCAAEF
EAYTPYYYSTYEPGARVQQPGQPVFFSPGEDEVRPFSGKSRIMILGGGPNRIGQGIEFDY
CCVQAAFALRDNGYEVIMVNSNPETVSTDYDTSDHLFFEPLTPEDVLNINDKMKPEGVIV
QFGGQTPLNLATPLQDAGVPIIGTSVDSIDVAENRERFAKLVNEIGLLQPANGTAVDESQ
ALRVARRIGFPILVRPSFVLGGRDMKIVYNEDELTAYIRRVEPDLSRDRPVLIDQFLENA
TEVDVDCLSDGTRTVIGGVMQHIEEAGIHSGDSACVIPPYSLPADVISEIKVQARKLATA
LNVKGLMNIQFAVAGIRAGGIVTDKPKVYILEANPRASRTVPFVSKATGVPLARLAALVM
VGKTLDELGVKDEVIPTHYSIKESVFPFNKFPGVDIILGPEMKSTGEVMGIDDSMPMAFA
KAQLAASSRLPEGGTVFISVANRDKDAVLPIARGFAEMGFKVIATRGTAQFLRERGVPVE
DVPKIAEGRPNLLDHMKNGKVQLVINTPTGRGSSTDESKIRAEAVASRVTAITTLSAAQA
AVEACRALKQQQLTVTALQDRFPQK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgtaccgacatcaagaagatcctgctcatcggctccggccccatcatcatt
ggccaagcgtgcgagttcgactactcgggaacgcaggcctgcaaagcacttcgcgaagag
ggttattcggtcgtcctggtgaattccaacccggcgaccatcatgaccgacccggagacg
gccgaccgcacgtacattgagccgatcacctgggaagttgttgagaaaatcatcgttgcg
gagcgcccggacgcgctcctgcccaccctcggcgggcagaccgcgctcaacaccgcgatg
gacctgttcaagaagggcgtgttggcgaagcacggcgtcgagatgatcggcgccaacgcg
gacgtgatcgataaggccgaggaccggcagcggttcaaggacgcgatgctgaagatcggc
gtctccgtgccgaaatcggtcgtggttcactcgctcgaagaggcgatgcgcgcggtcgaa
gaagtggggctgccgtgcgtgctgcgcccgagctttacgatgggcggcaccggcggcggg
atcgcgtacaaccgcgacgagtaccgcgacctcatcacccacgggctgcagctctcgccc
accacggaagtgctcgtcgaagagtccgtgatcggctggaaagagtacgaattagaggtg
atgcgcgaccgggccgataacgtcgtcatcatctgctccatcgagaacctcgacccgatg
ggggtccacaccggcgacagcatcacggtcgcgcccgcgcaaacgctctccgacaaggag
taccagcggatgcgcgacaaggcgaaggacatcatccgcgagatcggggtcgagaccggc
gggagcaacatccagttcgcgatcaacccggccgatgggcgcatgatcgcgatcgaaatg
aatccgcgcgtgtcccgcagtagcgccctcgcgtcgaaggccaccgggttcccgatcgcg
aagatcgcggccaaactcgctgtcgggtatacgctcgacgaactccgcaacgacatcacg
cgcgagacgccggcctgcttcgagccgaccatcgactacgtcgtgacgaaggttcctcga
ttcgcgttcgagaagttcccggaagcgaacccgacgctcaccacgcagatgaagagcgtc
ggcgagacgatggcgatcgggcgcacgttcaaggaatcgctccagaaggcgctccgcggc
ctggaagtcaaccgcttcggcctcggttgcgacaagcgcgaccggtggggcaccgcgaat
ccgcccgcgcgtgaggaaatcacgttcaagctctccagtcccaacgcggaacgggtctgg
tacctgcggtacgctttcctcgccgggatgtcgctcgacgagatccaccagcgcacgaag
atcgatccgtggttcctgcgcggcgtcgaggatctggtcaacatcgaacacgaactgcgt
gcggtcggatcgctcgataaagtgacgcccgagctgatgctgaaagccaagcagagtggg
ttcatcgatcgacaactggcgcacatttggaacgtcgcggaagccgaagttcggaagctc
cgcaagagtttcggaatcgaggcggtgttcaaaagcgtggacacgtgcgcggccgagttc
gaggcgtacacaccgtactactactcgacctacgaacctggtgcgcgggtccagcagccg
ggccagcccgtgttcttttccccgggcgaagacgaggtccgtccgttcagcgggaagtcg
cggatcatgatcctcggcgggggaccgaaccggatcggccagggcatcgagttcgactac
tgctgcgtgcaagccgcgttcgcgctgcgtgacaacggctacgaagtcatcatggtgaac
tcgaaccccgagaccgtgagcaccgactacgacacgtccgaccacctgttcttcgagccg
ctcacgcccgaggacgtgctcaacatcaacgacaagatgaagcccgagggcgtgatcgtg
cagttcggcggacaaacaccgctgaacctcgccacgccgctccaggacgcgggcgtgccc
atcatcgggacgagcgtggacagcatcgacgtggccgagaaccgcgagcggttcgccaag
ctcgtcaacgaaatcgggctgctccagcccgcgaacggcacggcggtggacgaatcgcag
gctctccgcgtcgcgcgccggatcgggttcccgattctggtgcgcccgagcttcgtgctc
ggcgggcgcgacatgaagatcgtctacaacgaggacgaactcaccgcgtacattcgccgg
gtcgaacccgatttgtcgcgcgaccgcccggtgctgatcgaccagttcctcgaaaacgcg
accgaagtcgacgtggactgcctgagcgacggtacccgcaccgtgatcggcggcgtgatg
cagcacattgaggaagccgggatccactccggcgactccgcgtgcgtgatcccaccgtac
agtttgcccgcggacgtcatttcggagatcaaggttcaggcgcgcaagttggccaccgca
ctgaacgtaaaagggctgatgaacatccagtttgcggtcgccgggattcgcgcgggcggg
atcgtcaccgataagcccaaggtttacatcctcgaagcgaacccgcgtgcgagccgaaca
gttccctttgtgtcgaaggcgaccggggtgccactcgctcgactcgcggcgctcgtcatg
gtgggtaagacgctcgacgagctgggtgtgaaggacgaggtcatcccgacgcactactcg
atcaaagagagcgtgttcccgttcaacaagttccccggcgtggacatcatcctcgggccg
gaaatgaagtccaccggcgaagtcatggggatcgatgactcgatgccgatggcattcgcg
aaagcacaactcgcggccagttcgcgcttgcccgagggcggaacggtgttcatctccgtc
gcgaaccgcgacaaagacgcggtgctcccgatcgcacgcgggttcgccgagatgggcttc
aaggtgatcgcgacgcgcgggaccgcacagttcttacgcgaacgcggcgtgccggtggag
gacgttccgaaaatcgcggaggggcgcccgaacctgctcgaccacatgaagaacgggaag
gtgcagttggtcatcaacacaccgaccgggcggggcagttccaccgacgagtcgaagatt
cgggccgaagcggtcgcgagccgtgtgaccgcgatcaccacgctgtccgccgcacaagcc
gccgtcgaagcgtgccgggcgctcaaacagcagcaactaaccgttaccgcacttcaggac
cgattcccgcagaaatga
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