Gemmata massiliana: SOIL9_23990
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Entry
SOIL9_23990 CDS
T06634
Name
(GenBank) dna gyrase subunit b : DNA gyrase subunit B OS=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) GN=gyrB PE=3 SV=1: DNA_gyraseB
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gms03032
]
SOIL9_23990
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_23990
Enzymes [BR:
gms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SOIL9_23990
DNA replication proteins [BR:
gms03032
]
Prokaryotic type
DNA Topoisomerases
SOIL9_23990
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SOIL9_23990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
Motif
Other DBs
NCBI-ProteinID:
VTR95315
UniProt:
A0A6P2D4F4
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All DBs
Position
1:5452240..5453394
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AA seq
384 aa
AA seq
DB search
MCPERGPAEYTEEHIRLLTDVEAVRRRPQMYSGGTDSRGLHGLLFSLVTDSLHEIMRASG
RALSVTLHADNSVAIADDRAPVFEELSLESVFTQWHGFGPGPNGLYLGTYLTVNALSAEL
NVCVRTDGSVYQHTFRRGVTHAVLQSGGPSNDRGLTIRFRPDPLIFGELQFDSGMIRDML
RQYAFLHSGVRISFTDESAGAHDKFEFSDGIRAYVQLLDTNRTPIHPDVIVIRGEQAGID
YEVGLQWCEEDEICTSFANDYYMPTGGTHVRGTRTGVTKAINRFIRTRMIGERPVQGDDA
RAGLTAIISVRLEDPIFISAARTNLGNPEVEHVIASRVEQELLRLFEVNPEVAERVVRRA
ILERDLREAAHAARKSLRLKKRKQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccggaacgaggccctgcggaatatacggaagaacacatccgcctcctcaccgac
gtcgaagcggtccgccgacgcccccagatgtacagtggcggcaccgattcgcgcgggtta
cacggtctccttttcagtctggttacggactcactccacgagatcatgcgagcgagtggg
cgcgcgttgagtgtcacccttcacgcagataattctgtcgcaatcgctgacgacagagcc
ccagtcttcgaggaactttcgctcgaatccgtcttcacccagtggcacggattcggtcct
ggcccgaacgggttgtatttgggaacgtacttgaccgtgaacgccctctccgcggaactg
aacgtctgcgtgcggaccgacggaagcgtctaccaacacacgttccggcgcggcgtcacg
cacgcggtgctgcaaagcggtgggccatccaacgaccgcggactaacgatccgctttcgg
cccgatccgctcatctttggcgagttgcaattcgatagcggaatgatccgcgatatgctc
cggcagtacgcattcctgcacagcggggtacgcatctcgttcaccgacgaatcagccggt
gcgcacgacaagttcgagttcagtgacggcatccgggcctacgtgcaattgctggacacc
aaccgcacgccgattcacccggacgtgatcgtgattcgcggggaacaggccggtatcgat
tacgaagtcggactacagtggtgcgaggaagacgagatttgcacgtcttttgcgaacgac
tactacatgccgactggtgggactcacgttcgtgggacgcgcacgggcgtgacaaaagca
atcaatcgtttcatccgtacacgaatgatcggcgaacgacccgtacaaggtgatgacgca
cgcgccgggttgacggccattatctcggtgcggttggaagaccccatctttatcagcgcc
gcacgaacgaacctggggaaccccgaagtcgagcacgttattgcatcgcgtgtggaacag
gaactactccgcctctttgaagtcaatcccgaggtcgccgagcgcgtcgttcgccgcgcg
attctggagcgggatcttcgtgaagccgcacacgcagcgcgaaaaagtctacgactcaag
aagcgaaagcagtaa
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