Gemmata massiliana: SOIL9_29100
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Entry
SOIL9_29100 CDS
T06634
Name
(GenBank) sigma-70 family rna polymerase sigma factor : RNA polymerase sigma factor, sigma-70 family OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6419 PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: HlyD_2
KO
K02005
HlyD family secretion protein
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
SOIL9_29100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
BSH_CzcB
Sigma70_r2
BSH_RND
YknX_C
Sigma70_r4
RND-MFP_C
Beta-barrel_RND_2
BSH_CusB
Peptidase_M23
Biotin_lipoyl
PhyR_sigma-like
HTH_23
BSH_YknX
CzcB_C
HTH_28
YqfD
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
VTR94804
UniProt:
A0A6P2D3X2
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Position
1:complement(4832528..4834669)
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AA seq
713 aa
AA seq
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MNHGPRRLPRIPSLSSTGPPIDADLLARFISTGDEVAFELLVRRHAPMVLAVCRRVLADP
NDADDAFQAAFLVLARKAASVARAEVLAGWLYRIAYRAAVRVRSDRLRRATHADASPDLL
PAPTTDPNARELERVLDEEVAKLPERHRVAFVLCCLEGKTGEEAGRLIGCPPGTVSSRLT
RARERLRERLTRRGFAPALIVTVLSACAESAAAVSALTALIDSTVHAAPGFATRRPTAAL
TARPATIAEGVIRTMNATKLKTLALLFALGLLAVGGVFAAPNASPEEEPNQPPKAKVGGA
QKAPAAPVVRVVQPQRGGLDRVSRNAGHAEPLQQADLFATIAGTLKRVNVNLGDHVKRGQ
LLAEIDAPALVLEERRAQIDIEQAKSLLHEAEARLIAAKAEINTAKLTVKQRETEEAGAK
ATHVLWRKKHDQIVKISGAGTSDASDAELHLRTAETQLEGATVAIESAKSDVAVKQSKLL
QTEANVGNAKTTIEAANLALQKARLALEQAKIEAPFDGVVTRQNASAGDHVRPTERDTDR
ALFTLTRVDRVRFVTAVPESEVAHATVGASAVVTFASRPGVRINEKISRIGFAIEKNGRM
RVEVDVPAATNDIRPGMFGEVTLTLGKGPADALRVPLSAITEGPKERPGGSHGVYVYRDG
KARLTFVKVSQHNEKEVEIASGLTADDLVVVDPKGLKSQPEVAVEVERPAPPK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccacggaccgcgccgcctaccccgaatcccgtccctcagctcgaccggtccaccg
atcgacgcggatttgctcgcgcggttcatcagtacgggtgatgaggtcgcgttcgagttg
ctcgttcgccggcacgcgccgatggtgctcgctgtctgtcgccgcgtgctcgcggacccg
aacgacgccgacgatgcgttccaagccgcgttcctggtgctcgcacgcaaagcggcctcg
gtcgcgcgggcggaagtgctcgcggggtggctgtacaggatcgcgtaccgggccgcggtt
cgggtccgttcggaccggctccgccgtgcgacgcacgcggacgcgagccccgaccttctc
cccgcccccacgaccgacccgaacgcgcgagaactggagcgcgtgctggacgaggaggtc
gccaagttaccggagcggcaccgggtcgcgttcgtactctgctgtttggaaggcaaaacc
ggcgaagaagcggggcgcctgatcgggtgcccgcccggaaccgtttcctcgcgattgacc
cgcgcacgcgagcgccttcgggagcgcctgacccgccgcgggttcgctccggcactcatc
gtcactgtgctgagtgcgtgcgccgagagcgcagcggccgtgtccgcactgaccgcgctc
atcgattccaccgttcacgctgcacccggtttcgcaacccggcgcccgacagccgcgctc
accgctcgacccgccacgatcgcggaaggagtgatccgaaccatgaacgcgaccaaactc
aagaccctcgctctcttatttgccctggggcttctcgcagttggtggcgtgtttgccgca
ccgaacgccagccccgaagaagaaccgaaccaaccgccgaaggcgaaagttgggggcgcg
cagaaagccccggccgctcccgttgttcgggtcgttcaaccgcaacgcggcggactggac
cgggtttcccggaacgccggccacgccgaaccgctccagcaagccgatttgttcgccacg
atcgcgggaacgttgaagagagtcaacgtgaacctcggcgatcacgtcaaacgtggtcaa
ctcctggccgagatcgacgcgccggcgctcgttttggaagagcgccgagcgcagatcgat
attgaacaggcgaaaagtttactccacgaggccgaagcccggctcatcgcagcaaaggca
gaaatcaacacggccaagctcaccgtcaaacagcgcgaaaccgaagaggccggagccaaa
gcgacccacgttctctggaggaagaaacacgatcagatcgtcaaaatttctggtgccggt
acatcggacgcttccgatgccgaactgcatttgcgcacagccgaaacccaactcgaaggt
gcaacggtagccattgaaagtgcgaaaagtgacgtagccgtaaaacagagcaagctgctt
caaactgaggccaacgtgggtaacgccaaaaccaccattgaagcggccaatctcgcgctc
cagaaggctcgtctcgcgctggaacaagcgaaaatcgaagccccgttcgacggtgtcgtg
acccggcagaacgcctccgccggtgaccacgtgcgccccactgaacgagataccgaccga
gcgttgtttaccctcacgcgcgtggaccgcgtgcggttcgtcacggccgtccctgaatcg
gaagtggctcacgctacggtgggggcttctgcggttgtcacgttcgcctcacggcccggg
gtccgcatcaacgaaaagatctctcggatcgggttcgcgatcgaaaagaacggcaggatg
cgcgtcgaggtcgatgtcccggccgcgaccaacgacatccgaccgggtatgttcggtgag
gttacgctgaccctcgggaaagggccggcggacgcgcttcgcgtgcccctcagcgcgatt
accgaggggccgaaggaacggcccggaggttcacacggtgtgtacgtgtatcgcgacggc
aaagcccggctcaccttcgtgaaagtcagtcagcacaacgagaaagaagttgaaattgca
tccggtctgacagcagacgatctcgttgtggtcgatcccaaggggttgaagtcacagccc
gaagttgcggtcgaggtcgagcgcccggcgcccccgaagtga
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