Gemmata massiliana: SOIL9_30690
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Entry
SOIL9_30690 CDS
T06634
Name
(GenBank) dna topoisomerase : DNA topoisomerase (ATP-hydrolyzing) OS=uncultured planctomycete GN=HGMM_F22C11C08 PE=4 SV=1: DNA_topoisoIV: DNA_gyraseA_C: DNA_gyraseA_C: DNA_gyraseA_C
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gms03032
]
SOIL9_30690
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_30690
Enzymes [BR:
gms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SOIL9_30690
DNA replication proteins [BR:
gms03032
]
Prokaryotic type
DNA Topoisomerases
SOIL9_30690
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SOIL9_30690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CdiI_ImmP
SNaCT5
Motif
Other DBs
NCBI-ProteinID:
VTR94645
UniProt:
A0A6P2D2M5
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All DBs
Position
1:4631264..4633618
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AA seq
784 aa
AA seq
DB search
MAESIETVSIASEVRTRFLTYAMSVVSGRALPDVRDGLKPVQRRILYAMSNDLNLSFDRK
ALKCAKIVGEVMGNYHPHGDSALYEALVRMSQNWVLRVPLVYGQGNFGSVDGDPPAAYRY
TEAKLTRQAEMLLDELGQQTVDFNPSYDGTRQEPSVLPAQFPNLLVNGTAGIAVGMATQI
PPHNLGEVLRGCVLLIDNPDASVANLLDKIKGPDFPLGGKILADRATLRKIYEEGTGTIK
VQAEWKEEEYERGKSQIVVTSIPYGVNKGDLENTIGAIIDQRKLPQLTGQANESNEKDGL
RLVLEVKAGTDPNLVMAYLYKHTELQKSFSYNVTALVPNEDGTRMVPKDGLSLKDLLRHF
LDFRLATVRRRYEYHLRQLRKRIHILEGFAIIFNALDRAIKIIRESSGKSDAAEKLKSTF
KLDDEQVGAILDSQLYKIAQMEIKKILDELAEKKKQAKEFEAILASEKKLWGVIKGELEK
LIENFPERRKTRMASDEDVLTFDEEAYIVRENTNVVLTRNGRIKRVGRLAAVESTRVEEG
DEVVAVIPGSTLDHVAFFADDGAAYTMRINEVPATAGYGEPITKFFKLGDGVKVVAAVTS
DPRFTPADAAPKGDTPGGPFLLVCTRNGFVLRLPLTAFRTESTKVGRRFVKLETGDKVVM
VRLVGAEESLMLATAGGYVTHFPLDQVSILSGAGRGVIGIELDPKDDCLGGILVGGRFDK
LVVETENGKTQDFGPGAIKSRKRGAKGEKPGARTKFTRVVPTPIELADWDVVEGKKTKDD
AKSD
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtcgatcgaaacggtttctattgccagcgaggtgcggacccggttcctcaca
tacgcgatgtccgtggtgagcgggcgcgcgctgccggacgtgcgcgacggcctcaagccc
gttcagcgccgcatcctctacgcgatgtcgaacgacctgaacctgagtttcgatcgcaag
gcgctgaagtgcgccaagatcgtcggtgaggtgatgggtaactaccacccgcacggcgac
agcgcgctgtacgaggcgctcgtgcgaatgtcgcaaaactgggtgctccgcgtgccgctc
gtgtacgggcaggggaactttggctcggtcgacggcgacccgcccgcggcgtaccggtac
acggaagcgaaactcacgcgccaggccgagatgctgctcgacgaactcggacagcaaacg
gtcgatttcaacccgagttacgacggcacgcgccaggaaccgagcgtgctcccggcgcag
ttcccgaacctcctggtgaacgggaccgcgggcatcgcggtgggcatggcgacgcagatc
ccgccgcacaacctcggcgaagtgctccgcgggtgcgtgctcctgatcgacaacccggac
gcgagcgtcgcgaacctgctcgacaagatcaagggaccggacttcccgctcggcgggaag
attctcgcggaccgcgcgacgctgcgcaagatctacgaggaggggaccgggacgatcaaa
gttcaggccgagtggaaggaagaggaatacgaacggggcaagtcacagatcgtcgtcacg
tccatcccctacggcgtgaacaagggcgatctggaaaacaccatcggcgcaatcatcgat
cagcgcaaactgccgcaactgacgggacaagcgaacgagtccaacgagaaggacgggttg
cggctcgtactggaagtgaaggccggcaccgatcccaacttggtgatggcgtacctgtac
aagcacaccgagttgcagaagtcgttctcgtacaacgtgaccgcgctcgtcccgaacgag
gacggcacgcggatggtcccgaaggacggtctgagcctcaaggatctgctccgacacttc
ctcgacttccgtctcgcgacagtgcggcgccggtacgagtaccacctgcgacaactccgc
aagcggattcacatcttggaaggcttcgcgatcatcttcaacgcgctcgatcgtgcgatc
aagatcatccgcgaatcgagcggcaaatcggacgcggccgagaagctgaagtccaccttc
aagctcgacgacgagcaagtgggcgcgatcctggactcgcagctctacaagatcgcgcag
atggagatcaagaagatcctggacgaactcgcggagaagaagaaacaggcgaaggagttc
gaggccattctcgcttcggaaaagaaactttggggcgttatcaagggcgaactggaaaaa
ctgatcgagaactttcccgagcgccggaagacgcggatggcgtccgacgaggacgtgctc
acgttcgacgaagaagcgtacatcgtgcgcgaaaatacgaacgtggtgctcacgcgcaac
gggcgcatcaagcgcgtcgggcgcctggccgcggtcgagagcacgcgcgtcgaagagggc
gacgaggtcgtcgcggttattccggggagcacgctcgaccacgtcgcgttctttgccgat
gacggcgccgcgtacacgatgcggatcaacgaagttcccgcgaccgcggggtacggtgag
ccgatcaccaagttcttcaaactcggcgacggcgtgaaggtcgtggccgcggtgaccagc
gacccgcgcttcacgcccgcggacgcggcacccaagggcgacactcctggtggtccgttc
ttgctcgtgtgtacgcgcaacggattcgtgctgcggctcccgcttaccgcgttccgaacg
gagtccacgaaggtcggtcggcgcttcgtgaaactcgaaacaggtgataaggtggtgatg
gtgcggctcgtgggggccgaagagagcctgatgctcgcaaccgcgggtgggtacgtcacg
cacttcccgctggatcaggtttcgatcctctccggcgcgggtaggggggtgatcgggatc
gaactggacccgaaagacgactgcttgggcggtattctggtcggtggccggttcgacaag
ctcgtcgttgagaccgagaacgggaagacccaggacttcggcccgggggcgatcaagagc
cgaaagcgcggggcgaagggcgaaaaacccggggcgcggaccaagttcactcgcgtcgta
ccgacgccaatcgagttggccgactgggacgtggttgaaggcaagaagaccaaagacgat
gcaaaatccgactga
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