Gemmata massiliana: SOIL9_35130
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Entry
SOIL9_35130 CDS
T06634
Name
(GenBank) cadherin-related protein : Uncharacterized protein OS=Cylindrospermopsis raciborskii CS-505 GN=CRC_01020 PE=3 SV=1: MAM: Lectin_C: Lectin_C: PKD
KO
K20276
large repetitive protein
Organism
gms
Gemmata massiliana
Pathway
gms02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SOIL9_35130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
Lectin_C
ThuA
K319L-like_PKD
PKD
HemolysinCabind
LBP_M
Cadherin_4
Big_9
Motif
Other DBs
NCBI-ProteinID:
VTR94201
UniProt:
A0A6P2CYZ4
LinkDB
All DBs
Position
1:complement(4066387..4073049)
Genome browser
AA seq
2220 aa
AA seq
DB search
MFSLKSWLRRWKPVTRKPSSRRSPRRAPLGVARLEDRLVPSVLFSEDFSDNSAGWTLGTE
WQIGSATLSAGQSTGNPDPALDHTPTGDNGVAGVKIGGNAATTVHDYYYLTSPTINTASA
TAPVTLEFYRWLNSDYAPFMANRVEVFDGASWQAVWQTAGSPGIQDSSWQRQQFDVSAYK
NANMQVRFGFSVGSSGAFTMSSWNIDDVTITASDPPPTENGLSAQIVGAPANSSEGSAIT
VSAAVTDTVGTGPYAYVWSVTKNGASYAAGTSTDPTFTFTPDDNGTYLIGLTVTAPGGRT
SGATTGTGPTDVLIIYDALNAQTQSLKNSLEAAGFNVALSSTDETLFNGTNPSLAPFEAV
IHLNGTTWSSPMPVAGQNALVGYVQSGGAYLGSEWSSYETQYGSMGPMRDLALFDYQSER
FLTTLTLTEIAAQSAHPILANIPASVSFSASALIGPVHTFATNPATVLMTDQFGNAALAV
REFGTGRVVGFHNAGNYSGGTALSDTELQQLYIDGVKWASRRGAGGPGASATILVTNVAP
TATLSSAAPVPEAVPVTVTFTGAADASTADQAAGFRYSFATSAAGLATSYAGASPLASGQ
VTFPDNGTYTVFARIFDKDGGFRDYTTNVTVTNSAPTATISTGGSVGEGSAATVSLINPV
DSATDLSAGLRYSFSTSAANLATSYATAGAASAQQFSFPENGTYTVFARVFDKDGGSSDY
QTTVTVTNVAPIVTITGAPANSPEGTAITLGSTVSDPGSGDTFTYAWSVTKNGVPYATGT
PTNGSTFTFTPNDNGTYVVSLIVTDDDGGVGIAGTGSFGGPTAGTTDVLIIYDAATAPGT
IALRNALQAAGMNVSLSTTDETLFNGSNPFLTPYEAVIHLNGITWPTDMPLGGQTALVNY
VQNGGGYIGNEWNAYEFSVGRMQQMRDLILLNSVSNSSGNLTLTDVPGQSGHPILANVPS
PAFFSASYNVGQVRSYATQPAVALMRDQFGNDAVAVREFGIGHVVAFHHAGNYFSGTLND
ADVLQLYVDGVKWAARASGGQGATITVTNAAPTATDVSVTPVVNEGGTATVTGRITDPGA
ADTHTVTVSWGDGTSSTAVVNADRTFTATHVYTDDNPTGTPADVYQVGVSVRDDDGGVSG
GGTQELVTNGGFESGFTGWTTNVQSGTWSLNSGSTDPDGPGLPTAPISGQFDALAAQSGP
SRLILSAPIVVPTGITSAVLSWSDRIRNHYSQYSDPNQEWRVRVLDAAGNELTTVFSTNP
GDPLEQFGPNHRSVDLTALLQGRAGQTIRLSFELDDNLFYFNVNLDDVSLLTTTGPGIPV
TVTNVAPTAPVLQVSPAVGEDGTVTLTGTFTDAGLNDTHTVTVDWGDGSQTVLGGGATVP
VSQAVEYNGHRYYVIRQAGLSWFEAQNQAQRLGGNLVTINDAAENTFVSELLRSNFGYYA
LAWIGLNDEANEGQFGWVSGDPITYTNWFVQDGEPNDYPPQVTEDFAITNYAYGYGPGWW
NDLAGTRDSAIYWGAYAVVEVNPTRTFTLSHRYADDTAGAYTIGVTVTDDDTGASSATTT
ATVTNAAPTDLTVSADAVTINEDGSVTLTGSFTDRGTLDAHTVTIDWKDGTTSQVAVPGF
PGAPSPGVNLATSAEFGGHTYHFISTPLAWADAEAEARRMGGHLVTINSDAENLFLFHYV
RRAALQGDVQTWIGLSDGGTDGPLQWASGESLGYTNWATGQPSDLVGPTGYAFNYNNVEI
GARWGAFSAETPLFAVIEVDGKRTFTATHRYLDDAPSGTASDTYAIGVTVTDDDAGTTST
TVPVTVNNIAPVIGSLTGPVAGTQTTATPGGAPVAFSGVRGQPLAFSVGFSDTGTIDTHE
VQWNFGDGTVSGWLPASGSTASAPAHAFAATGTYTVTVTVRDDDGGTVSFAQQVVIKTIE
LQADPTDPSKTALVVGGTTGTDQIQLSGSSSVTVNLNGSYLGSFARTGRLAAYGQGGNDQ
VQISGNFEDVLVDAGAGTDQIQLSGTFRDLFTDGGAGNDQTQVSGNFRDAVLSAGSGNDT
VQVSGNFNTTTVSAGDGDDNVQISGTFARVLVAGGAGNDVLRVYGTGPSILVGGDGNDEL
VGSTGRSLLIGGRGADRITGSSAEDVLIAGFTAYDDDFGALTALHGVWVDPTKNYAQRVA
ALQLAGTIGGIRLAPDTVFDDDSADRLTGAAGRDWFLFAPTRDDVTDDAANESLGFTNTP
NT seq
6663 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgctcaagtcgtggttgcgccgttggaagccggtcactcgcaaaccgtcttcg
cgacggagcccgcgccgggcgccgctcggcgtcgcacgcctcgaagaccgcctcgtgccg
tccgtcctgttttccgaggatttctccgataacagcgccggttggaccctggggaccgaa
tggcaaatcggttcggccacgctctccgcgggtcagtcgacgggaaaccccgaccccgct
ctcgaccacaccccgacgggcgacaacggcgtcgcgggggtgaagatcggcgggaacgcg
gcgaccaccgtccacgattactactacctgaccagtccgacgatcaacacagccagcgcg
accgctcccgtcacgctggagttttaccgctggctcaacagcgactacgcgccgttcatg
gcgaaccgggtcgaagtattcgacggcgcgagctggcaggcggtctggcaaacggcgggt
tcgcccggcatccaggacagttcgtggcagcgccagcagttcgacgtctcggcctacaag
aacgcgaacatgcaggtgcggttcgggttcagcgtcggtagttccggcgcgttcacgatg
agttcgtggaacatcgacgatgtgacgatcacagccagtgacccgcctccgaccgaaaac
gggctgtccgctcagatcgtcggggcacccgcaaacagttccgaaggcagcgcgatcact
gtgagcgccgctgtgaccgacacggtcgggaccggcccttacgcctatgtgtggagcgta
acgaagaacggggcgtcctacgcagcgggaacctcgaccgaccccacttttacattcacc
cccgatgacaacggaacctacctcatcggtctcacggtaaccgcccccggcggtcgaacg
tcgggggccacaacgggtaccgggccgaccgacgtgctgattatctacgacgctctcaat
gcacaaacccagtcactgaagaactccctggaagcggccggtttcaacgtcgcgctcagt
tcgaccgacgaaactctgttcaacggaacgaacccgtccctggccccgttcgaggcggtc
atccacctgaacggcaccacgtggtcgagccccatgccggtggccgggcagaacgccctg
gtcggctacgttcagagcggcggagcgtacctgggcagcgagtggagttcgtatgagacg
cagtacggctcaatggggccgatgcgggatctcgcactgtttgactaccaaagcgagcgg
ttcctcaccacgctgacgctgaccgagatcgccgcccaatccgcgcacccgattctggcg
aacataccggcctcggtatcgttcagcgcgagcgctctcatcggccccgttcacacgttt
gctaccaatccggcgaccgtgctgatgaccgaccagttcggcaacgcggcgctcgcggta
cgggagttcggcaccgggcgggtggtcgggttccacaacgccggtaactactcgggcggg
accgcactgtcggacacagaactgcagcagctctacatcgacggcgtgaagtgggcgagc
cggcgcggggccggcggaccgggcgcgtcggcaacgattctggtaacgaacgttgccccc
acggccacgctgtcgagtgccgctcccgtgcccgaggcggtgccggtcaccgtcacgttc
accggcgcggccgacgcttcgaccgcggaccaagccgccggcttccgctacagcttcgcc
accagcgcggcggggctggcgaccagttacgccggcgccagcccgctcgcgagcgggcaa
gtcacgttcccggacaacggaacttacaccgtgttcgcccggatcttcgacaaggacggc
gggttccgcgactacaccacgaacgtgacggtgaccaactccgccccgaccgcgaccatt
tccaccggtgggtcggtcggcgaaggaagtgccgcgacggttagcctcatcaacccggtg
gactcggctacggacctgagtgcgggtctgcggtacagtttttcgacgagcgcggcgaac
ctcgccaccagttacgcgaccgcgggcgcagcaagcgcgcagcagttctcgttcccggag
aacggaacgtacaccgtcttcgcccgtgtgttcgataaagacggtgggtccagcgactac
cagaccacggtcacggtaaccaacgtcgccccgatcgttaccatcaccggagcgccggcg
aacagccccgaaggtacagcgatcacgctcggaagtacggtgagcgatcccggcagcggg
gacacgttcacttacgcctggagcgtgacgaagaacggggtgccctacgcgaccggaacc
ccgaccaacggctccacgttcaccttcacccccaacgacaacggaacctacgttgtttcc
ctgatagtgaccgacgacgacggcggggtcgggatcgcgggcacgggttcgttcggcggg
ccgacggccgggacgaccgacgtactcatcatctacgacgcggccacggcccccggtacg
atcgcgctccggaacgcgctccaggccgcggggatgaacgtctcgttgagcacgacggac
gagacgctgttcaacgggtcgaacccgttcctcacgccctacgaggcggtcattcacctc
aacgggatcacgtggccgaccgatatgccgctcggcgggcagacggcgctcgtgaactac
gttcagaacggcggcgggtacattggcaacgagtggaacgcttacgagttctcggtcgga
cgcatgcagcagatgcgcgacctgatcctcctcaactcggtcagcaacagctccggtaat
ctcacgctgacggacgtgccggggcagtccgggcacccgatcctggcgaacgtcccctca
cccgcgttctttagcgcctcgtacaacgtcggtcaggtgcgcagctacgcgacccagccg
gcggtcgcgctgatgcgggaccagttcggtaacgacgcggtcgcagtgcgcgagttcggc
atcgggcacgtggtcgcgttccaccacgccggcaactacttctcgggcaccctgaacgac
gcggacgtgctgcaactctacgtcgacggcgtgaagtgggcggcccgcgcgagcggcgga
cagggcgcgacgatcacggtcaccaacgccgcaccgacggccaccgacgtgagcgtcaca
ccggtcgtgaacgagggcggaacagccaccgttaccgggcggatcaccgacccaggtgcg
gccgatacccacaccgtcacggtttcctggggcgacggaacctcttccaccgcagtagtg
aacgcagacagaaccttcaccgcgacccacgtctacaccgacgacaacccgaccggcacg
cccgcggacgtttaccaggtcggggtctcggtccgcgacgacgacggcggagtgagtggg
ggcggtacccaggagctcgtcaccaacggtgggttcgagtcgggcttcacgggctggacc
acgaacgtgcagagcggaacctggtcgctcaactccgggagcaccgatccggacggtccg
ggactgcccaccgcgccgatttctggacagtttgatgccctcgcggcgcagtccgggccg
tcccggttgatcctgtcggccccgatcgtggtgcccaccgggatcacatccgcggtcctc
agttggtcggaccggattcggaaccactactcccagtacagcgacccgaaccaggagtgg
cgggtgcgcgtcctcgatgccgcggggaacgagctgacgaccgtgttctcgaccaacccc
ggcgacccgctcgaacagttcgggccaaaccaccggtccgtcgatctcaccgcgctcctg
caagggcgcgcggggcagacgatccggctcagcttcgagttggacgacaacctgttctac
ttcaacgtcaacctggacgacgtgagcctgctcacgacaacggggccgggcatcccggtc
accgtgaccaacgtcgccccgaccgcccctgtactccaggtcagccccgcggtcggcgag
gacgggacggttacgctcaccggcacgttcaccgacgccgggctgaacgacactcacacg
gttacggtggattggggcgacgggtcacagacggtcctcggcggcggtgcgacggtgccg
gtgtcgcaggcggtcgagtacaacggccaccgctattacgtcatccgccaggccgggctg
tcctggttcgaggcccagaaccaggcccagcggctcggcgggaacctagtcaccatcaac
gacgcggccgagaacacattcgtctccgaattgctccggtcgaacttcggctactacgcc
ctggcttggatcggcttgaacgacgaggcgaacgaggggcagttcgggtgggtctcgggc
gacccgatcacgtacacgaactggttcgtgcaggacggcgagccgaacgactacccgccg
caggtgacggaagacttcgccatcaccaactacgcctacgggtacggcccggggtggtgg
aacgacctcgccggtacgcgcgacagtgccatttattggggcgcctacgcggtcgtcgag
gtgaaccccacgcggaccttcacgctgtcgcaccgctacgcggacgataccgcgggcgcg
tacacgatcggggttaccgtcaccgacgatgatacgggtgcttcgagcgccactacaacg
gccacggtgaccaacgcggccccgaccgacctgaccgtgtccgccgacgcggtaacgatc
aacgaagacggttcggtcacactcaccggaagctttaccgatcgcggtacgctcgacgcg
cacacggtcacgatcgactggaaagacggtacgacctcacaggtcgcggtcccggggttc
cccggtgcgccgtccccgggtgttaacctcgcgaccagtgcggaattcgggggccacacc
taccacttcatctcgacgccgctcgcatgggcggacgccgaggcagaggcccggcgcatg
ggcggccacctcgtcaccatcaactcggacgcggagaacctgttcctcttccactacgtt
cgccgtgccgcgctccagggggacgtacaaacctggatcgggctgtccgacggcggcacc
gacgggccgcttcaatgggcctctggtgagtctctgggctacacgaactgggccaccggc
caaccgagcgatctcgtcggcccgaccgggtacgccttcaactacaacaacgtcgagatc
ggcgcccgttggggggcgttctcggccgaaacgcccctcttcgccgttatcgaggtggac
gggaagcgcaccttcaccgccacgcaccgctacctggacgacgccccgtccggaaccgcg
agcgacacctacgccatcggcgtaacggtcacggacgacgacgcgggaacgacctccaca
acggttccggttacggtgaacaacatcgccccggtcatcggttcgctcacgggaccggta
gccggtacgcaaacgaccgcgacaccgggcggggcgccggtcgcgttcagcggcgtgcgc
gggcaaccgctcgcgttctcggtcgggttcagtgacaccggaacgatcgacacccacgaa
gtgcagtggaatttcggcgacggtacggtcagcgggtggctccccgcatccggcagcact
gcgagcgccccggcgcacgcattcgccgcgaccggcacctacacggtcaccgttacggtc
cgcgacgacgacgggggaacggtttcgttcgcacagcaagttgtcatcaaaacgatcgag
ttgcaggccgacccgaccgacccgtccaaaaccgctctggtcgtcggtgggacaacgggt
accgaccagatccagctcagcggcagcagttccgtgaccgtgaacctgaacggctcctac
ctcggttcgttcgcccgtaccggtcggctcgccgcttacggccagggcggaaacgaccag
gtccagatcagcggtaacttcgaggacgttctggtcgatgccggggccggtaccgatcag
atccagttgtcgggcacgttccgcgatctcttcacggacggcggagcgggcaacgaccag
acccaggtgtccgggaacttccgcgacgcggttctgagcgcggggagcgggaacgatacc
gttcaggtgtccgggaacttcaatacgaccacggtgtcggcgggcgacggggacgacaac
gtgcaaatctccgggacgttcgcccgggtgctggtggccgggggcgcgggtaacgacgtg
ctccgggtctacgggacggggccttcgatcctcgtcggcggcgacgggaacgatgaactg
gtcggcagcaccgggcggagcctactgatcggcgggcgcggggcggaccggatcaccggc
agcagcgccgaagacgtcctgatcgcgggcttcaccgcttacgacgatgatttcggcgcc
ctgacggctctccacggtgtgtgggtcgatcccaccaagaactacgcccagcgagtcgcc
gcgctccaattggccggcacgatcgggggcatccggctggcccccgacaccgtgttcgac
gatgactccgcggaccggttgaccggcgccgcgggccgggactggttcctgttcgccccc
acccgcgacgacgtgaccgacgacgcggccaacgagtcgctcgggttcacaaatacccca
tga
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integrated database retrieval system
