Gemmata massiliana: SOIL9_38270
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Entry
SOIL9_38270 CDS
T06634
Name
(GenBank) dtdp-glucose -dehydratase : Marine sediment metagenome DNA, contig: S01H1_L05958 OS=marine sediment metagenome GN=S01H1_14926 PE=4 SV=1: Epimerase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gms
Gemmata massiliana
Pathway
gms00521
Streptomycin biosynthesis
gms00523
Polyketide sugar unit biosynthesis
gms00525
Acarbose and validamycin biosynthesis
gms00541
Biosynthesis of various nucleotide sugars
gms01100
Metabolic pathways
gms01110
Biosynthesis of secondary metabolites
gms01250
Biosynthesis of nucleotide sugars
Module
gms_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SOIL9_38270
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SOIL9_38270
01055 Biosynthesis of vancomycin group antibiotics
SOIL9_38270
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SOIL9_38270
00525 Acarbose and validamycin biosynthesis
SOIL9_38270
Enzymes [BR:
gms01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SOIL9_38270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
VTR93887
UniProt:
A0A6P2CZ96
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All DBs
Position
1:complement(3747287..3748300)
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AA seq
337 aa
AA seq
DB search
MTAPRMGAGVERFCVIGSNSFSGASFVASALKAGAEVLGISRSPEADPVFLPYRWADASR
FTFRQLDLNRDLNAIDAALREFRPDFVVNFAAQGMVAQSWANPEHWYRTNTVAMAGLHER
LRTMDFLKKFVQASTPEVYGNTSGLVSENAPFNPSTPYAISKAACDMNLLAYQRAYGFPV
VFTRSANVCGPAQALYRIIPKTVLCVLTGKRLRLEGGGTSVRSFIHIDDVSDATLRAARD
GAPGSVFHLSTPLNQTIRSVVEEVCRQLGAPFEDSVEMVGARLGQDAAYLLDSTAARTKL
EWEPRRGIADAIADTIAWTKKNLDTLRSAPAEYIHKE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcaccaagaatgggggcgggtgtggagcggttctgtgtaattggtagcaactcg
ttctccggtgcgagtttcgtcgcatcggctctaaaagcgggggccgaggtgctcggcatc
agccggtccccggaagcggacccggtgttcctgccgtaccgctgggccgatgcgagtcga
ttcacgttccgccaactcgacctgaaccgcgatctgaacgcgatcgacgcggcgctccgg
gagtttcggcccgatttcgtggtgaatttcgcggcccagggcatggtcgcacagagctgg
gccaatcccgagcactggtaccgcaccaacacggtcgcgatggccgggctgcacgagcgc
ctgcgcacgatggacttcctcaagaagttcgtccaggcgtcgacccccgaggtgtacggc
aacacgtccggtctcgtgtccgagaacgccccgtttaacccgagcacgccctacgcgatc
tcgaaggccgcgtgcgacatgaacctgctcgcgtaccagcgggcctacgggttcccggtg
gtgttcacgcgctcggccaacgtgtgcggaccggctcaagcgctgtaccggatcatcccc
aagacggtcctgtgcgtgctcaccggcaagcgactgcggctcgaagggggcggcaccagc
gtccgctcgttcattcacatcgatgacgtgtccgacgccactctgcgtgctgcacgtgac
ggggcaccgggatcggtgttccacctatcaacacctctgaatcaaacgatccggtccgtg
gtcgaagaggtgtgccgccaactcggggcgccgttcgaggactcggtcgagatggtcggg
gccagactcggacaggacgccgcgtacctgctcgactcgaccgccgctcgtaccaaactc
gagtgggaaccgcgtcgcgggatcgcggacgcgatcgcagatacgatcgcctggaccaag
aagaacctggatacgctccgcagcgccccggccgagtacatccacaaggaatag
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