Gemmata massiliana: SOIL9_41720
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Entry
SOIL9_41720 CDS
T06634
Name
(GenBank) uracil-dna glycosylase : Uracil-DNA glycosylase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=ung PE=3 SV=1: UDG
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gms
Gemmata massiliana
Pathway
gms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOIL9_41720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_41720
Enzymes [BR:
gms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SOIL9_41720
DNA repair and recombination proteins [BR:
gms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOIL9_41720
Prokaryotic type
SOIL9_41720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VTR93542
UniProt:
A0A6P2D279
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All DBs
Position
1:complement(3302509..3303327)
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AA seq
272 aa
AA seq
DB search
MGKKKKDAESPSLFDEEKPVVLPTEAATAEPKVEELPPLPPGIPGLPADLDPSWRAALEP
ETRKPYWAELAKFVTEERKAHTVFPPAPDVFNAFRYTPLDKVKVLLLGQDPYHGPGQAHG
LCFSVRPGVTPPPSLRNIYKELETDLGIPPVKHGYLVTWAQRGVLMLNACMTVRKGAANS
HAGKGWEKFTDAAIRAVNDQKRTVVFLLWGAYAGKKLPLIDQKRHVVVKSAHPSPFSEHL
FFGTKPFSKINTALEAAGEEPIDWHLPKKVEE
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagaagaagaaagacgccgaatcgccgtctctgttcgacgaagaaaagccggtt
gtcttacctaccgaagccgccactgcggaaccgaaagtcgaagaactcccaccacttccg
cccggtatccccgggttaccggccgatctcgacccgtcgtggcgcgcggccctcgaaccg
gaaacgcggaaaccatactgggccgaactcgccaagttcgtcacggaagaacgtaaggcc
cacaccgttttcccgcccgcgcctgacgtgttcaacgccttccgctacacgcccctcgac
aaagtgaaggtgctcctgctgggtcaagacccgtaccacggcccgggccaggcacacggg
ctgtgtttctccgttcgtccgggtgtaacgccccccccttctctgcgcaacatctacaag
gaactcgaaaccgacctcggcattccgccggtgaagcacgggtacctcgtcacctgggcg
cagcgcggggtgctgatgctgaacgcctgtatgaccgtgcggaagggcgcggccaactcg
cacgccggtaaggggtgggagaagttcaccgacgcggccattcgcgcggtcaacgatcag
aagcggaccgttgtgttcctactatggggcgcttatgcagggaagaaactcccgctcatc
gaccaaaagcgacacgtggtcgtaaagtccgcgcacccgtcgccgttctccgagcacttg
ttcttcggcaccaaaccgttctcgaagatcaacaccgcactcgaagcggccggtgaagaa
ccaatcgactggcacttgcccaagaaggtggaggaatag
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