Gemmata massiliana: SOIL9_41830
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Entry
SOIL9_41830 CDS
T06634
Name
(GenBank) nuclease subunit d : Nuclease SbcCD, D subunit OS=gamma proteobacterium NOR5-3 GN=NOR53_2663 PE=4 SV=1: Metallophos
KO
K03547
DNA repair protein SbcD/Mre11
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_41830
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SOIL9_41830
Archaeal homologous recombinant proteins
SOIL9_41830
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
VTR93531
UniProt:
A0A6P2CX07
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All DBs
Position
1:complement(3288151..3289383)
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AA seq
410 aa
AA seq
DB search
MRILHTADWHLGDRLGRIDRTDDLRKAVERVADYCKQENVDVLLVAGDLFSELARPDGLR
ETIRHWQSVFSPFLESGGTILTLTGNHDNENFCQTLVSAMSLASPTVGKPGETVPPGRLY
LAADPTFIRLEDRMGGFPVQFVLMPYPTPHRFLRGETGLKYGSPEEKNALLVAAWADALR
EIRAHPKYDLKAPSVLGAHVHVHGSTIGPSLFRITVEEDVVVEGAELPNQFDYVALGHIH
KPQWLGAEHMRYCGSIERLDLGEQADQKGVILVDIGPDGRNGEPVVLPLHATPIYEVVVL
DPAEDIPRLRAEYPSANNDLVNLQIRYTAGKDQLEDVLRDLDKIFPRWYARDWKETGALG
PTLVSPATGGGKGFGETVHEYLAQELIQHDEAERDAILKIADGLLKEMEN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcctccacaccgcggactggcacctcggcgaccggctcggccggatcgaccga
accgacgacctgcgtaaagcggtcgagcgcgtcgccgattactgcaaacaagaaaacgtc
gatgtgctactcgtcgcgggcgacctcttcagcgagttggcccgcccggacgggttgcgc
gaaaccatccgccactggcagtccgtcttcagcccgttcctcgaatccggcggcacgatc
ctcacgctcaccggcaaccacgacaacgagaacttctgccagacgctcgtgagcgcaatg
tcgctcgcgtcgcccacggtcggcaagccgggcgaaacggtaccgccgggccggttgtac
ctcgcggccgaccccacgttcatccggctcgaagaccgaatgggcgggttcccggtccag
ttcgtgctgatgccgtaccccactccacaccggttcctccggggcgaaaccggcctgaaa
tacggcagcccggaagagaagaacgcgctactcgttgctgcgtgggccgacgcgctgcgt
gagatccgcgcgcacccaaagtacgatctcaaagccccctcggtgctcggcgcgcacgtc
cacgttcacggctccaccatcgggccgagcctgtttcgcatcaccgtggaagaggacgtg
gtggttgaaggcgcggaactgccgaaccagttcgattacgtggctctgggccacatccac
aaaccgcagtggctcggcgcggaacacatgcggtattgcggcagtatcgagcgcctggac
ctgggcgaacaggccgaccaaaaaggcgtcattttggtcgatatcggcccggacgggcgg
aacggagagccggtcgtgctcccgctccacgcgacgccgatttacgaagtcgtggtgctc
gacccggcggaagacattccgcgcctgagagcggagtacccgagcgcgaacaacgacctc
gtgaaccttcagatccgctacaccgcgggtaaggaccagctcgaagacgtgctgcgggac
ttggacaagatcttcccgcgctggtacgcacgcgactggaaggagaccggcgcgctgggt
ccgacgctggtaagccccgcaacaggcggcggaaaggggttcggtgaaacggtccacgag
tacctggcgcaagagctgatccagcacgacgaggccgaacgcgacgcgatcctgaaaatc
gccgacggattgctgaaggaaatggagaactag
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