Gemmata massiliana: SOIL9_42840
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Entry
SOIL9_42840 CDS
T06634
Name
(GenBank) phenylalanyl-trna synthetase subunit beta : Phenylalanine--tRNA ligase beta subunit OS=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) GN=pheT PE=3 SV=1: tRNA_bind: B3_4: B5: FDX-ACB
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
gms
Gemmata massiliana
Pathway
gms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOIL9_42840
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gms01007
]
SOIL9_42840
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gms03016
]
SOIL9_42840
Enzymes [BR:
gms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
SOIL9_42840
Amino acid related enzymes [BR:
gms01007
]
Aminoacyl-tRNA synthetase
Class II (U)
SOIL9_42840
Transfer RNA biogenesis [BR:
gms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOIL9_42840
Prokaryotic type
SOIL9_42840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
VTR93430
UniProt:
A0A6P2D205
LinkDB
All DBs
Position
1:3157525..3160062
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AA seq
845 aa
AA seq
DB search
MLVPLSWLKDYVPLPADPGALVERLTIAGLESSGVKVFGFPVQGTLRVKPEDAGLVWERD
KLVVAQVLEITKHPNADSLKLVKLDLGTGTPKTVITGAENIAVGQSGMKIILGLAGSQYF
FTGKDGKKGVMTLVMKPLRGIDNDAMCMSDFELGIAEESEGIIILDDADATPGTPAQDVL
GEIVVELDILPNMARCLSMIGIAREVAALTGVSATTAEPKVETVAESIEGKVRVEIADPK
LCPRYTATVIRNVTLGPAPRWMRSRLHYAGMRPISNAVDITNYVMLEHGQPLHAFDYDVL
VKRAGGKAPTIIVRPAKPGEVLKTLDGQDRELSPENLVIADTAGPIALAGVMGGAETEVS
AATKTILLESACFDFVSVRKTARQFNLFSEASTRFSRGVHPEQSLPAAVRAAQLFHDHAG
GQVLAGAVDEYPAPLPPQVIDLDQNEIRRLLGFDIPSAEVVRVLTALQFQVEPDGDDAWT
VTTPPTRLDIQAGAADLIEELARVYGYDNLKERLLPLELPEPKGNPDLEGEDRVRDLLAD
QGLQEAITYSLSSLEAEAKLTPGESSPPDAFVALLNPLSPERGVLRRTLLPGLLAVAQKN
LEAADSVAMYELGFVYLPVPGARLPREPRKLAVVLCGRRTGAAWDDPQGAVPARYDFYDL
KGVMEALASDLHLPGVTFAATGTVPWLHPMRAAELRVNGTAVGAFGELHPKVAAQFLLGD
RAVQVAELDLEAVLAAVPARYGYKPFSTFPPAKRDVAVVVADATPAEAVLAEIRAAGGEL
LTDAALFDVYRGTGLPDGTKSLAFALTYQAPDRTLGEKEIVKAHEKVEGRLRHVLKAQIR
GKDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgctcgttccgctgtcctggctcaaagattacgtcccgctcccggccgatccgggcgcg
ctcgtcgagcgcctgacgatcgccggactggaatcgtcgggggtcaaggtctttgggttc
cccgtacaagggacgctccgcgtgaagccggaggacgcggggctcgtgtgggagcgcgac
aaactcgtcgtcgcgcaggtactcgagatcaccaaacatcccaacgctgatagtctcaaa
ctcgtcaaactcgatctgggaacgggcacgccgaagaccgtcatcaccggggccgagaac
attgcagttggccagagcgggatgaagatcatcctcgggctggccgggtcgcaatacttc
ttcaccggtaaggacggcaagaagggcgtcatgacgctcgtaatgaagcccctgcgcggc
atcgacaacgacgccatgtgcatgtccgacttcgagctgggcatcgccgaggagagcgag
ggcatcattatcctcgacgacgcggacgccaccccgggcaccccggcccaggacgtgctc
ggcgagatcgtcgtcgaactcgacatcctgccgaacatggcccggtgcctctcgatgatc
ggcatcgcgcgcgaggtggccgcgctcaccggcgtgagtgccacgaccgccgaaccgaag
gtcgaaacggtcgcggagagcatcgagggtaaggtccgcgtcgagatcgcagacccgaaa
ctgtgcccgcgctacaccgcgaccgtcatccgcaacgtgacgctcgggccggccccgcgc
tggatgcgctcgcgcctgcactacgcgggcatgcgccccatcagtaacgcggtcgacatc
accaactacgtgatgctcgaacacggccagccgctgcacgccttcgactacgacgtgctc
gtgaagcgtgccggtgggaaggcgccgaccatcatcgtgcgccccgcgaagcccggcgag
gtactcaagacgctcgacggccaggaccgcgaactgtcgcccgagaacctcgtgatcgcc
gacaccgccgggccgatcgcgctggctggagtcatgggcggcgcggagacggaagtcagc
gccgcgaccaagacgatcctgctggaaagcgcgtgcttcgacttcgtcagcgtgcgcaag
accgcccggcagttcaacctgttcagcgaggcgagcacgcggttcagccgcggcgttcac
cccgaacaatcgctcccggccgcggtccgcgccgcgcaactgttccacgaccacgccggg
ggccaagtgctcgcgggtgcggtcgacgagtaccccgcgccgctgcccccacaggtgatc
gatctcgaccaaaacgagatccggcgccttctggggttcgacatcccgagcgccgaggtc
gtccgcgtgctgaccgcgctccagtttcaggtggaaccggacggcgacgacgcctggacc
gttacgaccccgcccacgcgcctcgacatccaggccggcgccgcggatctcattgaagaa
ctggcccgcgtgtacgggtacgacaacctgaaggagcgcctgctcccgctcgaactcccg
gagccgaagggcaacccggacctggagggcgaggaccgcgtgcgcgacctgctcgccgat
caggggttgcaagaagcgatcacgtactcgctcagcagcctggaagccgaagcgaaactg
acgccgggcgagagttcgccccccgacgccttcgtcgctctactgaacccgctctcgccg
gagcgcggggtgctgcggcgcacgctgctccccgggctactcgcggtcgcgcagaagaac
ctcgaagccgctgacagcgtcgctatgtacgaactcgggtttgtgtacctgcccgtgccc
ggcgcgaggctcccgcgcgaaccgcggaaactggcggttgtgttgtgcggccggcgcacc
ggggccgcgtgggacgacccacagggcgcggtcccggcgcgctacgatttctatgatctc
aagggcgtgatggaggcgctggcgagcgacttgcacctgcccggcgtcacgttcgcggcc
accggcaccgtgccctggctgcacccgatgcgggccgccgagctgcgcgtgaacggtacc
gcggtgggcgcgttcggcgagctgcacccgaaggtcgcggcgcagttcctgctcggggac
cgggccgtgcaggtggccgaactggacctcgaagcggtgctcgcggcggtgccggcgcgc
tacgggtacaagccgttcagcacgttcccgcccgcgaagcgcgacgtggcggtcgtggtg
gccgacgcgaccccggccgaggcggtgctggccgaaatccgggccgccgggggcgaactg
ctcaccgacgcggccctcttcgacgtgtaccgcggcaccgggctaccggacggcacgaag
agcctggcgttcgcgctgacgtaccaagcccccgaccgcacgctcggcgagaaggagatc
gtgaaggcccacgagaaggtcgagggccggctgcgccacgtgctcaaggcccagatccgt
ggtaaggatctggcgtaa
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