Gemmata massiliana: SOIL9_50890
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Entry
SOIL9_50890 CDS
T06634
Name
(GenBank) Metal dependent phosphohydrolase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_1993 PE=4 SV=1: TraI_2
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gms03019
]
SOIL9_50890
Messenger RNA biogenesis [BR:
gms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SOIL9_50890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
TraI_2
OB_YrrC
Motif
Other DBs
NCBI-ProteinID:
VTR92625
UniProt:
A0A6P2CWU7
LinkDB
All DBs
Position
1:complement(2286380..2287399)
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AA seq
339 aa
AA seq
DB search
MSKAKKPVLAKLSDLQAGNYVDCFVQLAEKQRKTLADGKPFITCKYRDAKRTVGAVPIWG
DAPLFEQALDWQVGQFFKVRATYTEHEKYGPQLDVEQIRQVEDRDRADGFSELDFVERSR
HDPAEMFAELETIVTGEIVDGPLRVLVLNLLTTHAATLKTLPASTRHFYTFAGGWLEHTL
SVARSCIWLSDRYAAQFPELNPPLNRGLVVAAAVLHDIGRVRGVDLPPGQPGHVNVPGEL
FGHLFLGYDMIRTAAHAVPDLDPELLDLLLHCVITPLRLPERGASRFPCIPEALILHHAD
ELDGKMEMHVRCLTRDTSEGPFTDRDPVLGRPLLKARKV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagccaagaagccagtgttggcgaagctgtcggacctccaagcagggaattac
gtcgattgcttcgtgcaactcgcggagaagcagcgcaaaacactggcggacggcaaaccg
ttcatcacctgtaagtatcgcgacgccaagcgcaccgttggtgctgtgcccatttggggc
gacgcaccgctgttcgagcaggctctggattggcaagtcgggcagttcttcaaggtgcgc
gcgacctacactgagcacgagaaatacggcccgcaactcgacgttgagcagatccggcag
gtcgaggaccgcgaccgcgcggacgggttcagtgaactcgatttcgtggagcgctcccgg
cacgacccggccgagatgtttgcagaactcgaaaccatcgtgaccggcgagattgtcgac
ggcccgctccgcgtgctcgtgctgaacctgctcaccacacacgccgcgacgctcaaaaca
ctcccggcctccacccggcacttctacacgttcgcgggcggctggctcgaacacacgctt
tcggtcgcgcgctcgtgtatctggctgtcggaccggtacgcggctcagttccccgaattg
aacccgccactcaatcgcgggctggtggtcgcggccgctgtactgcacgacatcggccgg
gtccgcggagtggacctaccgcccggccagcccgggcacgtcaacgttcccggcgagttg
ttcgggcacctgttcctcggctacgacatgatccgcacagccgcgcacgcggtacccgat
ctcgatcccgaactgctcgacctcctgttacactgcgttatcactcccctgcgactcccc
gagcgcggggcgtcgcggttcccgtgtatccccgaagccctgattctccaccacgcggac
gaactcgacgggaagatggaaatgcacgtccggtgcctcacgcgcgacacgtccgaaggg
ccattcaccgaccgcgaccccgtactcgggcgcccgctgttaaaggcgcgcaaggtgtga
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