Gemmata massiliana: SOIL9_54580
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Entry
SOIL9_54580 CDS
T06634
Name
(GenBank) histidyl-trna synthetase : Histidine--tRNA ligase OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=hisS PE=3 SV=1: tRNA-synt_His: HGTP_anticodon
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
gms
Gemmata massiliana
Pathway
gms00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SOIL9_54580
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gms01007
]
SOIL9_54580
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gms03016
]
SOIL9_54580
Enzymes [BR:
gms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SOIL9_54580
Amino acid related enzymes [BR:
gms01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SOIL9_54580
Transfer RNA biogenesis [BR:
gms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SOIL9_54580
Prokaryotic type
SOIL9_54580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
Motif
Other DBs
NCBI-ProteinID:
VTR92256
UniProt:
A0A6P2CV50
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All DBs
Position
1:1832261..1833643
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AA seq
460 aa
AA seq
DB search
MSNLITPRTLSGFRDYLPAVMLAREEVLRRAREVYRSYGFTPIDTPACESLDVLLGKGGD
ESDKLVYRVLSARGDKAEMGLRFDLTVPFARFSAQYINELGTPFKRYAMGPVWRGERPGQ
GRYREFWQCDFDTIGTTSNAADIETALVINDLFTAIGFDKFEIRVNNRKLLNGLLEAVGL
RDKSVIVLRAIDKLDKIGRDAVLAEMTNQEVSLLAARNVLDFTQLRGADALDKLEEVLPI
VETVLKPRLKETKENIAGGQQLIEEGIAQLRELLAVTKAAGVPEERIKIDLSIARGLDYY
TGTIYETFLTDLPGIGSVCSGGRYDNLASKYTKQVLPGVGASLGVDRLIAAMEELKHPLL
TGQTTPAQVLVVNFDATRLGDYQRIARALRAACVNVEVYPDTTKKIGTQFAYAEKRGFKL
AVVAGPAEFEQGVWKVKDLAKREEAAVPEAELVERIKQQV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatctgattaccccccgaacgctgtccgggttccgtgattacctgccggcggtc
atgctcgcgcgagaagaggtgctgcgccgtgcccgcgaggtgtaccgctcctacggcttc
actcccatcgatacgcccgcgtgcgaatcgctcgacgttctgctgggtaaggggggtgac
gagtccgacaagctcgtgtaccgcgtgctgagtgcccgtggtgacaaagcggagatgggg
ctacggttcgacctcactgtgccgttcgcccggttcagtgcgcaatacatcaacgaactc
ggcacaccgttcaagcgctacgcgatgggaccggtgtggcgcggcgagcgcccggggcag
gggcggtaccgcgaattctggcagtgcgacttcgacaccatcggcaccacgtccaacgcc
gccgacatcgaaacggcactcgtcatcaacgacctcttcaccgcgatcggcttcgacaag
ttcgagatccgcgtcaacaatcggaaactgttgaacggattgctcgaagccgtcggctta
cgagacaagtcggttattgttcttcgagctattgataaactcgacaagatcggaagagac
gcggttctggccgagatgaccaatcaagaggtgtcgcttcttgctgctcgtaacgtgttg
gatttcacgcaacttcgtggtgccgatgcactcgacaaacttgaagaagtgcttccgata
gtcgaaacagttcttaaacctaggcttaaagaaaccaaagagaacattgcgggcggtcag
caacttatcgaagagggcatcgcacagttgcgcgaactgctcgcggtcacgaaagcggcc
ggagttcccgaagaacgcatcaagatcgacctgagtatcgcgcgcgggctggattactac
actggcaccatttacgaaacgttcctgaccgacctgcccggcatcggcagcgtgtgcagc
ggcgggcggtacgacaacctcgcgagcaagtacacgaaacaagtgctcccgggagtggga
gcgtcgctcggcgtggaccggctcatcgccgcaatggaggagctgaaacatccgctcctc
acagggcaaaccacgccggctcaggtgctggtcgtgaacttcgacgcgacccgtctgggc
gactaccagcgcattgctcgggcgcttcgggccgcgtgcgtaaacgtcgaagtgtacccc
gacacaacgaagaagatcgggacgcagttcgcctacgccgagaagcgcggcttcaaactc
gcggtggtcgctggccccgccgagttcgagcagggcgtgtggaaggtcaaggatctggcg
aaacgcgaagaagccgcggtaccggaagcggaactggtcgagcgcatcaagcaacaggtg
tga
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