Gemmata massiliana: SOIL9_55200
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Entry
SOIL9_55200 CDS
T06634
Name
(GenBank) dihydrolipoamide dehydrogenase : Dihydrolipoyl dehydrogenase OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_4534 PE=3 SV=1: Pyr_redox_2: Pyr_redox: Pyr_redox_dim
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
gms
Gemmata massiliana
Pathway
gms00010
Glycolysis / Gluconeogenesis
gms00020
Citrate cycle (TCA cycle)
gms00260
Glycine, serine and threonine metabolism
gms00280
Valine, leucine and isoleucine degradation
gms00310
Lysine degradation
gms00380
Tryptophan metabolism
gms00620
Pyruvate metabolism
gms00630
Glyoxylate and dicarboxylate metabolism
gms00640
Propanoate metabolism
gms00670
One carbon pool by folate
gms00785
Lipoic acid metabolism
gms01100
Metabolic pathways
gms01110
Biosynthesis of secondary metabolites
gms01120
Microbial metabolism in diverse environments
gms01200
Carbon metabolism
gms01210
2-Oxocarboxylic acid metabolism
gms01240
Biosynthesis of cofactors
Module
gms_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gms_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gms_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
gms_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SOIL9_55200
00020 Citrate cycle (TCA cycle)
SOIL9_55200
00620 Pyruvate metabolism
SOIL9_55200
00630 Glyoxylate and dicarboxylate metabolism
SOIL9_55200
00640 Propanoate metabolism
SOIL9_55200
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SOIL9_55200
00280 Valine, leucine and isoleucine degradation
SOIL9_55200
00310 Lysine degradation
SOIL9_55200
00380 Tryptophan metabolism
SOIL9_55200
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SOIL9_55200
00670 One carbon pool by folate
SOIL9_55200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gms04147
]
SOIL9_55200
Enzymes [BR:
gms01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
SOIL9_55200
Exosome [BR:
gms04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
SOIL9_55200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
HI0933_like
3HCDH_N
FAD_binding_2
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
NAD_binding_7
UDPG_MGDP_dh_N
Lys_Orn_oxgnase
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
VTR92194
UniProt:
A0A6P2CWU9
LinkDB
All DBs
Position
1:1762734..1764158
Genome browser
AA seq
474 aa
AA seq
DB search
MSDVRETQLLVIGGGPGGYPAALHAADHGIKVTLVDEGAKLGGVCLNRGCIPSKALLHTA
KIIREAHEMANYGVTFGEPTLDLAKLRDFVQAKVVGKLTGGIGQLTKGRGVDVVKGRAVF
TSPNTVEVTGDAPQTIKFQNCIIATGSLPVVPKPWQINDDRVMDSTGALLLPDVPKKFLV
IGGGYIGLEIGSVYAALGSKVTVVEALDRILFMADKDLVDPLERKLKSEFEAIYTATKVM
GLEATKDGIVVKLEGAGAPASLTFDRVLISVGRRPNSAGLGLDKAGINVTEKGFIPIDKQ
RRTNVPHIFAIGDVGEEPGLAHKATAEARVAVEVIHGEPAEWNPRAIPAVIFTDPEIAWA
GITQKEADEKKIPYEALNFPWAASGRAVSIARTEGRTKMLVDPETKRILGVGIVGAGAGE
MIAESVLAIEMGAVARDVLESIHPHPTLSETVMESAELAYGAATHVGRPRKVAR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgttcgcgaaacgcagctcctcgtcatcggtggcggccccggcgggtaccca
gccgcgctccacgccgccgaccacgggatcaaggtcacgctggtggacgagggggcaaag
ctcggtggcgtgtgcctcaaccgagggtgcatcccgagcaaggcgctgctgcacactgcg
aagatcattcgcgaagcgcacgagatggcgaactacggcgtgacgttcggcgaaccgacg
ctcgacctcgccaagctgcgggacttcgtgcaggcgaaggtggtgggcaaactgacgggc
ggcatcggccagctcacgaagggccgcggggtcgatgtggtgaaggggcgcgcggtgttc
acgtcgcccaacacggtcgaggtgaccggcgatgcgccgcaaacgatcaagttccagaac
tgcatcatcgcgaccgggtcgctcccggtggtgccgaagccgtggcagatcaacgacgac
cgcgtgatggacagcaccggtgcgctcctgttgccggacgtgccgaagaaattcctcgtg
atcggcggtgggtacatcggcctggaaatcggcagcgtgtacgcggctctgggcagcaag
gtaacggtggtcgaagcgctcgatcgcatcctgttcatggccgacaaggatctcgttgat
ccgctcgaacggaagctcaagagcgagttcgaggcgatttacacggccacgaaggtgatg
gggctggaagcgacgaaggacggcatcgtcgtgaagctcgaaggggcgggggcgccggcg
tcgctgacgttcgaccgcgtgctcatttccgtcgggcgccggccgaactcggcgggtctc
gggctcgacaaggccggcatcaatgtgaccgaaaagggcttcattcccatcgacaaacag
cgccgcacgaacgtcccgcacatcttcgcgatcggcgacgtgggcgaggagcccggtctc
gctcacaaggccacggcggaagcccgcgttgcggtggaggtgatccacggcgaaccggcc
gaatggaacccgcgtgcgatcccggcggtgatcttcactgaccccgagatcgcgtgggcc
ggcatcacgcagaaggaagccgacgagaagaagatcccctacgaggcgctgaacttcccg
tgggccgcgagcggccgggccgtgagcatcgcccgcaccgaggggcgcacgaaaatgctc
gtcgaccccgaaaccaaacgcattctgggggtggggatcgtgggcgcgggtgccggcgag
atgatcgcggaaagcgttctggcgatcgaaatgggcgcggtggcgcgcgacgtgttggag
agcatccacccgcacccgacgctgagcgaaaccgtgatggagagcgccgaactcgcttac
ggggccgccacgcacgtcggccggccgcgcaaggtcgcgcggtag
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