Gemmata massiliana: SOIL9_56280
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Entry
SOIL9_56280 CDS
T06634
Name
(GenBank) cystathionine beta-lyase : Cystathionine beta-lyase/cystathionine gamma-synthase OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_7194 PE=3 SV=1: Cys_Met_Meta_PP
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
gms
Gemmata massiliana
Pathway
gms00260
Glycine, serine and threonine metabolism
gms00270
Cysteine and methionine metabolism
gms00450
Selenocompound metabolism
gms00670
One carbon pool by folate
gms01100
Metabolic pathways
gms01110
Biosynthesis of secondary metabolites
gms01230
Biosynthesis of amino acids
Module
gms_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SOIL9_56280
00270 Cysteine and methionine metabolism
SOIL9_56280
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SOIL9_56280
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SOIL9_56280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gms04147
]
SOIL9_56280
Enzymes [BR:
gms01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
SOIL9_56280
Exosome [BR:
gms04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SOIL9_56280
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Beta_elim_lyase
Aminotran_5
SelA
Motif
Other DBs
NCBI-ProteinID:
VTR92086
UniProt:
A0A6P2CUP2
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All DBs
Position
1:1646506..1647666
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AA seq
386 aa
AA seq
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MSTDHAQGFSTRAIHAGQDADPATGATVVPIYATSTYTQAAPGQHKGYEYSRSGNPTRTA
LETALASLEEGERGLAFASGLAATTAVFGALLRPGDEVVASADLYGGTFRLLDKVFKPWG
LVAKYTDDSSAAGFEKLITPKTKLVWIETPTNPLLQILDIAALAEVSRKHGAKLAVDNTF
ASPYLQRPLRLGADLVIHSTTKYLGGHSDVVGGCVVGAKDLLDPIKFYQNAAGGVPGPFD
SYLVLRGLKTLSVRMDRHCANAMELAPWLKAHPAVAKVYYPGLADHPGHAVAAKQMKSFG
GMISLKLHGGIPAAQQFLTRTKLFSLAESLGGVESLVCHPTTMTHASIPKDVREARGVDD
GLIRLSVGIEDVADLRADLDRALATA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgatcacgcgcaggggttcagcacgcgggccattcacgcggggcaggacgcg
gaccccgcgaccggggcgaccgtcgtgccgatctacgcgacgagcacctacacgcaggcc
gcgccggggcagcacaagggctacgagtacagccgcagcgggaaccccacgcgcacggcg
ctcgaaacggccctcgcgtctcttgaagagggcgagcgtggcctcgcgttcgcgtcgggc
ctggccgctacgaccgcggtgttcggcgcgctcctgcgacccggggacgaagtcgtcgcg
tccgcggacctctacggcggcacgttccggctgctcgacaaggtgttcaagccctgggga
ctggtcgcgaagtacaccgatgattcttcggccgcgggcttcgagaaactcatcacaccg
aagacgaagctcgtctggatcgaaacgccgaccaacccgctcctgcaaatcctcgatatc
gcagcgctcgccgaagtgagccgcaagcacggggccaagctcgcggtcgataacacgttc
gcatcgccgtacttgcagcgcccgctccggctcggggcggacctcgtgatccacagcaca
accaagtacctcggcgggcactcggacgtggtgggcgggtgcgtggtgggcgcgaaagac
ctgctcgacccgatcaaattctaccagaacgcggccggcggggtgccggggccgttcgac
tcgtacctcgtgctccgcgggctgaagacgttgagtgttcgcatggaccgccactgcgcg
aacgcgatggaactcgctccgtggctgaaggcgcacccggccgtcgccaaagtctactac
ccggggcttgccgatcaccccgggcacgcggtcgcggcgaaacagatgaagtcgttcggt
ggaatgatctcgctgaagttgcacggcggcatccccgcagcgcagcagttcctgacgcgc
acgaaactcttcagtttggcagagagcttgggcggtgtggaatcgctcgtgtgtcacccc
acgacgatgacgcacgcgagcatcccgaaggacgtgcgcgaggcccgcggcgtcgacgac
gggctgatccggctgagtgtggggatcgaggacgtggccgacctgcgtgccgacctcgat
cgcgctctcgccacggcgtaa
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