Gemmata massiliana: SOIL9_59510
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Entry
SOIL9_59510 CDS
T06634
Name
(GenBank) uracil-dna glycosylase : DNA polymerase, bacteriophage-type OS=Blastopirellula marina DSM 3645 GN=DSM3645_10402 PE=4 SV=1: UDG
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gms
Gemmata massiliana
Pathway
gms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOIL9_59510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_59510
Enzymes [BR:
gms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SOIL9_59510
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOIL9_59510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VTR91763
UniProt:
A0A6P2CS74
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All DBs
Position
1:1249613..1250374
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AA seq
253 aa
AA seq
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MSANGAIDLVQQVRAHLESLRAAGVLLVPRGERLAPRRLVAPPVSVAPVEVAPNAPNPVE
TRRQELTVLAKEIENCDKCSELFAVRTQPVFGAGPLDPEVAFVGDAPGSEEDAQGEPFVG
KGGQLLRRIIAACQLPSSQEYLLNIIKCRPPRNRAPTMAECGNCRDFFRRQFELVNPKYV
VALGLTASKLLTGKNLTVSALRGQVHEYRGVPLICTHHPNDIEKDTTERVKRETWEDMKL
LLRTMGRSVPGAK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgaacggtgcgatcgatctggttcagcaggtgcgggcgcacctcgaatcgctt
cgcgcggcgggagtattgctcgtgccgcgtggcgagcgtcttgctccccgtcgcctcgtt
gcaccgccggtatctgttgcgcccgttgaggtcgcgccgaatgcccccaacccggttgaa
acgcggcgccaagagctgaccgttcttgcgaaggaaatcgagaactgcgacaagtgcagc
gaactgttcgcggtccgcacgcagccggtgttcggggccgggccgctcgatccagaggtc
gcgttcgtcggggacgctcccgggtccgaagaggacgcgcagggcgagccgttcgtcggt
aagggcgggcagttacttcggcgcatcattgccgcgtgtcagttgccgtcgtcgcaagag
tacctgctcaacatcatcaagtgccggccgccgcggaaccgcgcgccgacgatggcggag
tgcggtaactgtcgcgacttcttccgtcggcagttcgagttggttaaccccaagtatgtc
gtggctctgggactcacggcatcgaagttactcaccgggaagaacctcacggtgagcgcg
ctgcgcgggcaggttcacgagtaccgcggggtgcctttgatttgtacgcaccacccgaac
gacatcgagaaggatacgaccgagcgcgtgaagcgcgagacgtgggaagatatgaaattg
ctactgcgcacgatgggccggtcggtgccgggcgcgaagtag
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