Gemmata massiliana: SOIL9_67580
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Entry
SOIL9_67580 CDS
T06634
Name
(GenBank) excinuclease abc subunit b : UvrABC system protein B OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=uvrB PE=3 SV=1: ResIII: Helicase_C: UvrB: UVR
KO
K03702
excinuclease ABC subunit B
Organism
gms
Gemmata massiliana
Pathway
gms03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SOIL9_67580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_67580
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SOIL9_67580
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SOIL9_67580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_25
AAA_5
DUF87
SLFN-g3_helicase
AAA_19
AAA_7
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
VTR90956
UniProt:
A0A6P2CRJ9
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All DBs
Position
1:294172..296262
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AA seq
696 aa
AA seq
DB search
MAAKFQLTSQYAPAGDQPKAIEQLTQGFANGKKVQVLLGATGTGKTFTASCMIEKLQKPT
LVLAHNKTLAAQLYKEFKGFFKNNAVHYFVSYYDYYQPEAYIPQRDIYIEKDSSINENID
RLRLAATSALVSREDVIIVASVSCIYGLGSPSDYKRMMVYIQKGETLDRDNTLLRLIDVQ
YKRNDIAFERGTVRVRGDTIDVWPASEEFAYRIELFGDEVETLSVIHPLTGETIKPLDEL
YIYPAKHFVTPEERVQAAVKGIEDELNARLEQFKNEGKILEMERLKARCRYDLDMLREVG
YCSGIENYARWFSGRAPGEPPYTLIDFFPEDFLLVVDESHVTLPQVRGMYFGDRSRKETL
VEHGFRLPSALDNRPLKFDEFEGRMKQCLCLSATPGPYELEKVGGEVVEQVIRPTGLVDP
VIHVKPARGQVKDLEAEVRARAAKGERALVTVLTKRMAEDLTTYFRDAGMRCKWLHSELD
AIERITVLRELREGQFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSDKSLIQTMGR
AARNVNAEVVLYADVVTDSMSRAMNETNRRRVIQLAYNVEHNITPTTVKTAIKNEIEDEI
EAHQMAQAAATGSTAAAEDYVTVEYVQSLYEEMLEAAKTLDFERAQALRDQIVKLEGELK
KKHGTAAPPSVLGNKSVPVSQPAGAKRKSKWKKGGA
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaagttccagctcaccagccagtacgcccccgcgggcgaccagcccaaggcc
atcgagcaactcacgcagggcttcgctaacggcaagaaggtgcaggtactcctcggcgcc
accgggaccgggaagacgttcaccgcgagctgcatgatcgagaagctccaaaaacccaca
ctcgtcctcgcgcacaacaagacgcttgcggcgcagctctacaaggagttcaaggggttc
ttcaagaacaacgcggtccactacttcgtcagctactacgactactaccagcccgaagcg
tacatcccgcagcgcgacatctacatcgaaaaagactcctcgattaacgagaacatcgac
cgactccggctcgccgcgacgtccgcgctcgtgagccgcgaagacgtcatcattgtggcg
agcgtctcgtgcatttacggtctcggtagcccgtccgattacaagcgaatgatggtctac
atccagaagggcgagacgctcgatcgcgacaacacgctcctgcggctcatcgacgtccag
tacaagcgcaacgacatcgcgttcgagcgcgggacggtccgggtgcgcggcgacaccatc
gacgtgtggcccgcgtccgaagagttcgcgtaccgcatcgagctgttcggcgacgaggtc
gaaacgctctcggtcattcacccgctcacgggcgagacaattaaaccgctcgacgaactg
tacatctacccggccaaacacttcgtcacgcccgaagagcgcgtgcaggcggccgtgaag
ggcatcgaagacgaactgaacgcccgactcgaacagttcaagaacgagggcaagattctc
gaaatggagcgccttaaagcgcgctgccggtacgacctcgacatgctccgcgaggtcggc
tactgctcgggtatcgagaactacgcccggtggttcagcgggcgcgcgccgggcgagccc
ccgtacacgctcatcgacttcttccccgaagatttcctgctcgtcgtggacgaatcgcac
gtcacactgccccaagtgcgcgggatgtacttcggcgaccgcagccgcaaagaaacgctc
gtcgagcacgggttccggctccccagcgcgctcgacaaccggccgctcaagttcgacgag
ttcgagggccggatgaagcagtgcctctgcctctccgccaccccaggcccctacgaactg
gagaaagtcggcggtgaggtcgtcgaacaggtcattcgcccgacggggttggtcgatccg
gtcattcacgtcaaacccgcacgcggacaagtgaaagacctggaagcggaagtgcgcgcc
cgcgccgcgaagggcgaacgggcgctcgttacggtgttgacgaagcgcatggccgaagac
ctcacgacgtatttccgcgacgccgggatgcggtgcaagtggttgcactcggaactcgac
gccatcgagcgcatcacggtgctgcgcgagctgcgcgagggacaatttgatgtactcgtc
ggcgtgaacctgttgcgcgagggtttggacctccccgaagtgtcgctggtcgcgatcctc
gacgcggacaaggaggggttcctccggtccgacaagtcgctgatccagacgatgggccgc
gccgcccggaacgtgaacgcggaggttgtgttgtacgcggacgtcgtgaccgactcgatg
agccgcgcgatgaacgagacgaaccgccggcgcgtgattcagctcgcgtacaacgtggag
cacaatatcacgccgacaacggtgaaaacggcgatcaagaacgagatcgaggacgagatc
gaagcacaccaaatggcgcaggccgccgcgaccggcagcactgccgcggcggaagactac
gtgacagtcgagtacgtgcagagcctctacgaagagatgctcgaagctgcgaagacattg
gatttcgagcgcgctcaggcgctgcgcgaccagatcgtgaagctcgaaggcgaactcaag
aagaagcacggcaccgcggcaccgccgagcgtcctaggcaacaagagcgttcccgtgagc
cagccggcgggcgccaagcgcaagtcgaaatggaagaagggcggagcgtga
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