Gemmata massiliana: SOIL9_73000
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Entry
SOIL9_73000 CDS
T06634
Name
(GenBank) ribosomal protein s12 methylthiotransferase : Ribosomal protein S12 methylthiotransferase RimO OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=rimO PE=3 SV=1: UPF0004: Radical_SAM
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gms03009
]
SOIL9_73000
Enzymes [BR:
gms01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SOIL9_73000
Ribosome biogenesis [BR:
gms03009
]
Prokaryotic type
ribosomal protein modification factors
SOIL9_73000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
FlgO
Motif
Other DBs
NCBI-ProteinID:
VTS03087
UniProt:
A0A6P2DMH7
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All DBs
Position
1:complement(9811046..9812455)
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AA seq
469 aa
AA seq
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MSVKSLPLTSSPGTGAPRAPESKGNYAFISLGCPKNTVDSERMLGKLAQDGYALQPGADG
ADVVIVNTCGFIEPARQESLAVIREMLDLKRAGKVGAVVVAGCMAERQRDVLLEQVPEVD
QIVGVFGREEIADVVDRAVSQRDEQKSLFRPAPVRALEDTARLRITPRHFAYLKISEGCD
RLCTYCAIPKMRGKHVTKPIEEIIREAHELAADGVRELIIVAQDTTYYGMDLYGCTRLAE
LLRELDKVDGIEWVRTLYAYPEHISDELIETFAGAKKIIPYLDMPLQHINDRVLKRMIRR
VDRAATEKLLLRLREQWPDLAIRTTFITGFPGETDAEYEELKQFVADFKFERVGVFPYSL
EPGTPAEKLDGHIPEDVKQTRVAAIMEVQQRVAFGWAEAQVDKEHPVIIDGPDPEFANHF
RGRTYADAPEIDCEVRVKGKNLKPGDFVRVKITAADGYDLTAKALGKPW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtgaagagtctcccgctgacctcaagtcccggaaccggcgcgccccgcgccccc
gaatccaaggggaactacgcattcattagtttgggctgcccgaagaacaccgtggacagc
gagcggatgctcgggaaactcgcccaggacggctacgcgctccaacccggggctgatggc
gcggacgtggtcattgtgaacacgtgcgggttcatcgaaccggcccgccaagagtcgctc
gcggtcattcgcgagatgctcgacctcaagagagccggtaaggttggtgctgtagtcgtg
gccgggtgcatggccgagcgccaacgcgacgtgctcctcgaacaggtgcccgaagtcgat
cagatcgtcggcgtgttcgggcgcgaggagatcgcggacgtcgtagaccgtgccgtctcc
cagcgcgacgagcagaagtccctgttccgcccggccccggtccgtgcccttgaggacacc
gcccgcctgcgcatcaccccgcgccacttcgcgtacctcaagatcagcgaggggtgtgat
cggctctgcacgtactgcgcgatcccgaagatgcgtgggaagcacgtgacgaagccgatc
gaggagatcatccgcgaggcccacgaactcgccgccgatggcgtgcgcgaactcatcatc
gtggcccaggacaccacttactacgggatggacctatacggctgcacgcggctcgcggaa
ttgctgcgcgagctcgataaggtcgacggcattgagtgggttcgcacgctctacgcctat
cccgaacacatttcggacgagctgatcgaaacgttcgccggcgccaaaaagatcatcccg
tacctggacatgccgctccagcacatcaacgaccgcgtgctgaaacgcatgatccgccgc
gtggaccgcgccgcgaccgaaaaactgctcctgcgcttgcgggagcagtggccggacctc
gcgatccgcaccacgttcatcacgggattccccggcgaaacggacgcggagtacgaggaa
ctcaaacagttcgtcgcggatttcaaattcgagcgcgtcggcgtgttcccctactcactc
gaaccgggcacacctgccgagaagctcgatggtcacattccggaagacgtgaagcagacg
cgcgtggccgcgatcatggaagtacaacagcgggtcgcgttcgggtgggcagaggcccag
gtcgataaagagcacccggtcattatcgacggcccggacccggagttcgcgaaccatttc
cgcgggcgcacctacgcggacgcgccggaaatcgattgcgaagtgcgagtgaagggcaaa
aacctcaagcccggtgacttcgtccgggtgaaaatcacggccgccgacggctacgacctt
accgcaaaggctctgggcaaaccgtggtga
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