Gemmata massiliana: SOIL9_73210
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Entry
SOIL9_73210 CDS
T06634
Name
(GenBank) formamidopyrimidine-dna glycosylase : Formamidopyrimidine-DNA glycosylase OS=Pseudogulbenkiania ferrooxidans 2002 GN=mutM PE=3 SV=1: Fapy_DNA_glyco: H2TH: zf-FPG_IleRS
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gms
Gemmata massiliana
Pathway
gms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOIL9_73210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_73210
Enzymes [BR:
gms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SOIL9_73210
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SOIL9_73210
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOIL9_73210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7571
NFACT_N
TMEM106_N
Thioredoxin_7
Motif
Other DBs
NCBI-ProteinID:
VTS03023
UniProt:
A0A6P2DL02
LinkDB
All DBs
Position
1:9786189..9787073
Genome browser
AA seq
294 aa
AA seq
DB search
MPELPEVETVVRDLRPLLVGRTITSVRQSRHKLRRPWKPAWNANAIDSRVESVRRRGKWI
LIDLASQSSSPLLRVHLGMSGQFTIVPATLAEPDHVHVVFALDGGNELRLRDPRRFGAAE
YFPDRAALETEMNADLGPEPFGLNADYFRSVVRGTARNLKAVLLDQKIVAGVGNIYADEA
LFRAKLHPGRAGKSVTNAECDHLREAIEAVLLRAIESRGSTIRDYVGGSGLRGGFQNEFA
VYGRTDERCSVCEGTIACARFAGRTSHYCPQCQSQGIGKKVKSTKTPRAPTSRS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccggaagtggaaacggttgttcgagatctgcgcccgttactcgtcggg
cgcacgatcaccagcgtccggcaaagccggcacaagctccggcgtccgtggaaaccggcg
tggaacgcgaacgccatcgactcgcgtgtcgaaagcgttcggcgccgcggaaagtggatt
ctgatagatctggcctcccaatcgtcttccccactactccgagttcacctcggaatgtcg
gggcaatttacgatcgtgcccgcgactctggcggaaccggatcacgtacacgtcgtgttc
gcgctcgacggtgggaatgaactccgactccgtgacccgcgccggttcggggccgcagag
tattttcccgatcgtgcggcgctcgaaaccgagatgaatgcggacctcggtcccgaaccg
tttggcctgaacgcggactactttcgcagcgtcgttcgtggaaccgcccgaaatctgaag
gccgttctgctcgatcagaagatcgttgccggtgtgggcaacatatacgcggacgaggcg
ctgttccgtgcgaaactgcacccggggcgggcgggtaagagtgtaaccaacgcggaatgt
gaccacctccgcgaagccatcgaagcggttctcctgcgagctatcgagtcgcgcggttcg
accattcgcgactacgtgggtgggtccggtctgcgcggcgggtttcagaacgagttcgcg
gtgtacggtcgcacggacgagcggtgctcggtgtgcgaaggcacgatcgcgtgcgcccgc
ttcgccgggcgcacgtcgcattactgtccgcagtgccaaagccaaggaattgggaagaag
gtgaaaagcacaaagactccgcgggcgccaacttcccggtcttga
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