Gemmata massiliana: SOIL9_77910
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Entry
SOIL9_77910 CDS
T06634
Name
(GenBank) dna topoisomerase : DNA topoisomerase OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=Cseg_3110 PE=4 SV=1: Topoisom_I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gms
Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gms03032
]
SOIL9_77910
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_77910
Enzymes [BR:
gms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SOIL9_77910
DNA replication proteins [BR:
gms03032
]
Prokaryotic type
DNA Topoisomerases
SOIL9_77910
DNA repair and recombination proteins [BR:
gms03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SOIL9_77910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
VTS01612
UniProt:
A0A6P2DLQ6
LinkDB
All DBs
Position
1:complement(9200106..9201149)
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AA seq
347 aa
AA seq
DB search
MPNLTARKSTQKKSTSPPFVFHAKARLRLWTDTKPALTRERAGSGFRYRDTDGRVVRCIA
TLARIRALAIPPAWVNVLICPDANGHLQAVGFDVRGRKQYRYHPAFRAKRDGTKYERVLA
FGRALSRIRTRVEYDLRRRGLSRDKVLAVVVKLLDRTHLRVGNAEYVRANQSFGLSTLLD
RHVTFTRGAVRIKFRGKSGVRHDRIVSDAKLARLVRQCRDLPGQDLFQYRAGSGSRPIGS
ADVNAYIRRAAGAEFTAKDFRTWAGTVKAAMKLAALPKPETKTEAERAVCSVVREVALEL
GNTPAVCRKSYVHPRVLEAFTGNGFPTTRARGHLSADESRVIRLLGG
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgccgaatctaaccgctcgtaaatcaacacaaaagaaaagcacgagtccgcctttcgtg
ttccacgctaaagcccgactgcgtctctggaccgacaccaaacccgcgctgacgcgcgag
cgcgcggggagcgggtttcggtatcgcgacacggacgggcgggtagtacggtgcattgcc
acactcgcacgcattcgggcactcgcgataccgcccgcgtgggtgaacgtgctcatctgc
ccggacgcgaacgggcacctccaggcggtcgggttcgacgtgcgcgggcgcaagcaatac
cggtatcacccggcgttccgagcgaagcgggacgggaccaagtacgagcgcgtgctcgcg
ttcgggcgcgctctgtcgcgcatccgcacgcgcgtcgagtacgacctccggcgacgcggg
ctctcgcgcgacaaggtgctcgcggtggtcgtgaagctgctcgaccgaacgcacctgcga
gtcgggaacgccgagtacgtgcgcgcgaaccagtcgttcggcctcagcacgctcctcgac
cgccacgtcacgttcacccgcggcgcggtgcgcatcaagttccgcgggaagagcggggtc
cgacacgaccgaatcgtttccgacgcgaagctcgcgcgcttggtccggcagtgccgtgac
ctgcccggtcaggatctgttccagtaccgcgccgggtccgggagccggcccatcggttcg
gcggacgtgaacgcctacatccgccgggctgcgggcgcggagttcaccgccaaagatttc
cgcacctgggccgggaccgtgaaggccgcgatgaaactggccgcactaccgaaacccgaa
accaaaaccgaggccgagcgcgcggtgtgcagcgtggtacgggaggtggcgctcgagttg
gggaacacacccgcggtgtgccgcaagagctacgttcacccacgggtactggaagcgttc
accgggaacggtttccccacgacgcgtgcccgcgggcacctctcggccgacgaatcgcgc
gtgatccggctcctcggcggctga
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