KEGG   Gemmata massiliana: SOIL9_78820
Entry
SOIL9_78820       CDS       T06634                                 
Name
(GenBank) CRISPR-associated helicase Cas3, subtype Dpsyc OS=Thioflavicoccus mobilis 8321 GN=Thimo_1278 PE=4 SV=1
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
gms  Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:gms00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gms02048]
    SOIL9_78820
Enzymes [BR:gms01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SOIL9_78820
Prokaryotic defense system [BR:gms02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    SOIL9_78820
SSDB
Motif
Pfam: Cas3-like_C_2 Cas3_HD ResIII HD Helicase_C
Other DBs
NCBI-ProteinID: VTS01341
UniProt: A0A6P2DL87
LinkDB
Position
1:complement(9117399..9121526)
AA seq 1375 aa
MSSPTPDQFEAFYKAATLAIAELELAERRVREPGYEPEKPPKAKEPFPWQERLATRVCGG
NWPRAIALPTAAGKTACIDIAIFALACGASDFRQPRRIFFVVDRRIVVDQAWMHAKKLAK
ALRTAKSGILKQVADALRAIAEPGWHELSEKEQDEVRPLDVYALRGGMYRESAWARSPLQ
PTVIASTVDQVGSRLLFRGYGVSDSMKPVHAGLVGNDSLILLDEAHCAKPFDQTMRAVEQ
YRAWGEKNEATLRFVSITATPLGGLPESQIERAAVEDRAHPVLGARINASKPARLVVAEK
AKGKTWKQWGKPLVEKLVEQAKELAGEFACVGIIVNRVATARELAKRLGAEAVLLTGRMR
PLDRDRLFTERLQPLLSGASGEPPKFVVGTQCLECGADFDFHALVTECASLDALRQRFGR
LNRVAARSSAKAVVVIRSDQTEPEEKETDRDPVYDNALANTWNWLNANAKDGVFDFGVSA
VNEVLSGVSDEKLSELNAPSKDAPVLFPAHLDCWVQTHPIPTPDPDPSLFLHGPKQAGQP
DVQVVFRADLGDNSDLWAEIVALCPPSSSEAVAVPIGVFKKWMTDELVTDDTADVEGGTP
EEKDEREEEPTPGERIALRWKGGDSDQTLVLTVPSDEFVRPGNLFVVPCSAPGIEGLGDF
PFGSVTDYAEEAFQCSRDKALLRLPDLVIPEDASKGEEIESATAAIERLRELPDGDLPDW
QKRAADHFAEPKNLRRCEIERHPLGGFVITGKRRLGQFAPTYLDDSEPAESFRGVAVTLK
DHSAGVAWHAERFAKVCGLDRMLFTQAGLWHDLGKLDPRFQAMLRQSSPRTAVGDPLAKS
ARSPRTEVERDEARQIHKYPKGARHELLSVALVTEKVGADKVNDLLLHLIATHHGSARPF
TSPVDDSTDGIDTHRPFTPELFGETFPSTSYRQDIRTWNAELPERFWRVIRKYGWWGAAY
HETVFRLADHTQSAAEQEDEVTPAPGVTAWVSTPTDTARPGAYPLPLTGFDGSNPLSFLA
ALGTLRLAEELFPGTMLKWQRVDLWRPTLMLPTATSPEEFVSRLHARVHCGIDPKAEEIS
EKRHKDYRQRKKTTELARQLVKDRKLRGKEREEAIAKEVSPLEIEEFAARREWLLALESA
VPAPFLSLGKSIAVSQEEFAAFASRNAQRLHKIGSSERSNADFTTAFGNEACIDGNGRII
PTEFQLITGSGHQFFLDTFGALMQSVTPDRLQRALFGPWVYSDLRLSFRWDPIDDRRYAV
SWEDPSSKEVRTEHGANLLAAFALPLFPVAPTRRGARTTGVNSDCEEATFTWPMWEDPRR
VDSIRSLFQCHRLRTEKVKLSTSESYGVALLYRTRKFEVGSPPLSKLNLCTAVPV
NT seq 4128 nt   +upstreamnt  +downstreamnt
atgagttcgcccacaccggaccagtttgaggcgttctacaaagccgctacgcttgcgatt
gctgagttggaattggccgaacgccgcgtgcgagaacccgggtacgaaccagagaagcca
ccaaaggcgaaagagccgttcccgtggcaggagcggttggcgactcgtgtgtgcggcggc
aactggccgcgggcgatcgcattgccgacggcggcgggcaagaccgcgtgcatcgacatc
gcgatattcgcgctggcgtgcggggcgtcggacttccgtcaacctcggcgcatcttcttc
gtcgtggaccggcgcatcgtcgtcgatcaggcgtggatgcacgcaaagaaactggcgaag
gcgcttcgcacagccaagtcgggaattctgaaacaggtcgcggatgcgctgcgcgccatt
gccgaaccggggtggcatgaactgagcgagaaggaacaggatgaagtgcgcccgctggat
gtgtacgcgcttcgcggcggcatgtatcgcgagtcggcgtgggcgcggtcgccactgcaa
cccacggtcatcgcttcgacggtcgatcaggtcggctcgcggttgttgttccgcgggtac
ggtgtgtccgattcgatgaagccggttcacgcggggttggtgggcaacgattcgctcatc
ctgctcgacgaggcccactgcgcgaaaccgttcgatcagacgatgcgggcagttgaacag
tatcgcgcgtggggtgagaaaaacgaggcgacgcttcgcttcgtgtccatcaccgcgacc
ccgttaggtggattgccggaatcacagatcgaacgtgccgctgtcgaagatcgcgctcac
ccggtgttgggcgcgcggatcaacgcgagcaagcccgctcgcctcgtcgtcgcggagaaa
gcgaagggcaaaacctggaagcagtggggcaagccgctcgtcgagaagttggtggagcaa
gcaaaagaactcgccggtgaattcgcgtgcgttgggatcatcgtgaaccgcgttgcaacg
gcgcgcgaactggcgaagagactcggggccgaagcggtgttgctcaccgggcgcatgcgc
ccgctcgaccgcgaccgcctgttcacggaacggttgcaaccgctcctttcgggtgcatcg
ggtgagccgccgaaattcgtagttgggacgcagtgcttggagtgtggcgccgatttcgat
ttccacgcgctggtgaccgagtgcgcgagcctcgacgcactccggcagcgattcgggcga
ttgaaccgcgttgccgcccggtcgagtgcgaaagcggtagtcgtgattcgcagtgaccaa
acggaacccgaggagaaggaaaccgaccgtgacccggtgtacgacaacgccctcgcgaac
acttggaattggctgaacgcgaacgcaaaggacggtgtgttcgatttcggcgtatcggca
gtgaatgaggtgctcagtggcgtttcggacgagaagctgtcggaactgaacgcaccgtct
aaagacgcgccagtgctgttccctgcccacctcgactgctgggtgcagacgcacccaatt
ccgacgcccgatcccgatccgtcgcttttcctgcacggcccgaagcaagcggggcagccg
gacgttcaggtcgtattccgtgccgacctcggcgataactcggacctgtgggccgagatc
gtcgcgctgtgccccccatcgtcgtccgaagccgtcgctgtaccgattggtgtgttcaag
aaatggatgactgacgaactcgtgacagacgacacggctgatgtggaaggcggaacaccc
gaggaaaaggacgagcgcgaagaggagccaacaccgggcgaacggatcgccctacgttgg
aagggcggtgattcggaccagacgctcgtgctcaccgttccgagcgacgagttcgtccgc
cccggcaacctgttcgtggttccgtgttctgcgcctgggattgaagggctgggtgatttt
ccttttggttccgtgacggactatgcagaggaagcgtttcaatgttcgcgtgacaaggcg
ttgttgcggttgccggatttggtgatccccgaggacgccagcaagggtgaagaaatcgaa
tcggccaccgcggctattgagcgactgagggaactacccgacggcgacttaccggattgg
cagaaacgggcagcagaccattttgccgaacccaagaaccttcggcgttgtgagatcgaa
cgccaccccctcggagggttcgtcatcactggtaagaggcgattgggtcagttcgccccg
acgtacttggacgacagtgaaccggccgagtcgttccgcggtgtcgcggtcacactgaag
gatcactctgccggggtcgcgtggcacgccgagcgcttcgccaaagtgtgcggtttggac
cgcatgttatttacgcaggccgggctgtggcacgacctcggaaagctcgatccgcggttc
caagcaatgttgcgccaatcgtcgccgcgaaccgcggtgggtgatccattagcgaagtct
gctcgttccccgcgtaccgaggtcgaacgtgacgaggcccgacagatccacaagtacccc
aaaggtgctcggcacgagctactctcggtcgcgttggtcaccgagaaagtcggtgctgat
aaggtcaatgacctcctgttgcacctgattgcgacgcaccacggctccgcgcgcccgttc
acgtctccggtggacgattccactgacggaatcgacacacatcggccattcacgcccgag
ctgttcggcgagacgtttccgtcgacctcttaccgccaggacattcggacttggaacgcg
gagttgccggaacggttctggcgggtgattcgtaagtacggttggtggggagcggcctat
cacgaaactgtgttccgcctcgccgatcacactcaaagcgctgcggaacaggaggatgaa
gtcactccggccccaggcgtcacagcgtgggtgtcaacaccgacagacacggcacgcccc
ggagcgtacccgctcccactaactggcttcgacggatctaacccgctctcgttccttgcc
gcgctgggtacgcttcgactggctgaggaactgtttccagggaccatgttgaagtggcaa
cgagttgatctatggcggcccactttgatgttgcccacggccacttcgcctgaagagttc
gtttcgcgactgcacgcgcgagtgcattgtggaatcgatccaaaagccgaggaaatctcc
gagaaaagacacaaggattatcggcaaagaaagaaaacgacggagttggctcgtcaatta
gtcaaggacagaaagctcagaggcaaggagcgcgaagaggctattgcaaaggaggtttcc
ccactggaaatcgaagaattcgcggcccggcgcgagtggcttcttgcgcttgaatcggcc
gttccagcaccattcctttccttgggtaaatcgattgccgtttcacaagaagaatttgcc
gcttttgcctctcggaacgcgcagcgcttacacaaaattggttccagcgaacggagcaac
gcggactttactacggcttttgggaatgaagcgtgcattgatggcaacgggcgtatcatt
ccgaccgagtttcaactcatcaccggctcggggcatcagtttttcttggacacgttcggt
gcgctgatgcagtcagtgacacccgatcggcttcaacgcgccctattcggtccgtgggtg
tactccgatctgcgactatcattccgttgggatccaattgacgatcggcgatacgctgtg
agctgggaagatccttcaagcaaggaggtccgaacagagcacggcgctaatcttctggcg
gcctttgcactgccactgtttccagtagctcctacccgtcgcggagcgcggacgacggga
gttaattcggattgcgaggaggcaacgttcacatggcccatgtgggaagatcctcgccgc
gttgatagcatccgctctcttttccaatgccatcgacttcgtaccgaaaaagtgaaatta
agtacgtcggaatcctacggagtggcattgctgtatcgaacacgcaaattcgaggtggga
tcgccgccgctatcgaaactaaatctgtgtacggcagttccagtgtga

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