Gemmata massiliana: SOIL9_79480
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Entry
SOIL9_79480 CDS
T06634
Name
(GenBank) a g-specific adenine glycosylase : A/G-specific adenine glycosylase OS=Blastopirellula marina DSM 3645 GN=DSM3645_11537 PE=4 SV=1: HhH-GPD: NUDIX_4
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gms
Gemmata massiliana
Pathway
gms03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOIL9_79480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gms03400
]
SOIL9_79480
Enzymes [BR:
gms01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
SOIL9_79480
DNA repair and recombination proteins [BR:
gms03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOIL9_79480
Prokaryotic type
SOIL9_79480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
NUDIX
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
VTS01143
UniProt:
A0A6P2DKL7
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All DBs
Position
1:9026998..9028251
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AA seq
417 aa
AA seq
DB search
MAPALHASNSRCFPLHPRPNLERGTRNWELPEGWSGRTLAGLRTKLLNWFDAHQRDLPWR
RDAAGQLTAPRDAYRVWVSEVMLQQTTVAAVVPYFERFMAALPNVRALAEADEQRVLKLW
EGLGYYRRARHLHAAAKELVANHLPTSEKGGADADHQLPDDPVVWESLPGVGRYILGAVL
SQAFDRSLPIVEANSLRVLARIFGYRKDPREGEGKVWVWGAAEAVLPQKRAGDFNQSLME
LGALICTPTAPACDTCPVSANCIANRDSLQDVIPPKKKPVAITEVAEVGVVIRDGDRLLL
CQRPADAGRWQNMWEVPHAPRAEGEDVSTAAVRAAKELTGFDIEPGAELLTIKHGVTRYA
ITLVCLEATHTGGKFAPGPYADAKWVSPTDLADYPVSSPQRKLMTALADPKRQPRLF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcccgcgctacacgcttcaaactcgcgatgctttcccctccacccccggcctaac
ttggaacgcggaacgcggaactgggaactccccgagggctggtccggccgcacgctcgct
ggcctgcgtaccaaactcctcaactggttcgacgctcaccaacgcgacctcccctggcgc
cgcgacgcggcgggccaactcaccgctccgcgcgacgcctaccgcgtttgggtcagtgag
gtcatgctccaacaaacgaccgtcgcggcggtagtgccatacttcgagcgcttcatggcc
gcgctgccgaacgtccgcgcgctggcagaagccgacgagcagcgggtgctgaagttgtgg
gaggggttggggtattaccggcgcgcccgacacctgcacgcggccgccaaggaactggta
gcgaaccaccttccgacatctgaaaaaggtggggcggacgcagaccatcaactgcccgac
gatcccgtagtgtgggaatcactgcccggcgtggggcggtacattctcggcgcggtgctg
tcgcaggcgttcgaccgctcgctcccgatcgtcgaggcgaacagtttgcgtgtactcgcg
cggatcttcggctaccgcaaagacccgcgcgagggcgaggggaaagtgtgggtgtgggga
gcggccgaggctgtactgcctcaaaagcgcgctggggacttcaaccagtcgctgatggaa
cttggcgccctgatctgcacgcccaccgcgcccgcgtgcgacacgtgcccggtttcggcg
aactgcatcgcgaaccgcgacagcctccaagacgtgatcccgcccaagaaaaagccggtc
gcgattacagaagtggccgaagtcggcgtagtgattcgcgacggtgacaggctgctgctg
tgccaacgaccggccgacgcggggcgctggcagaatatgtgggaagtgccccacgcgccg
cgcgctgagggcgaagacgtcagcaccgcggccgtgcgcgcggcgaaggaattgaccggt
ttcgacatcgaaccgggggcggagctactcaccatcaagcacggtgtaacgcgctacgcg
atcacgctcgtgtgcctcgaagcaactcacactggcggtaagttcgcacccggaccttac
gcggacgctaagtgggtatcgccgaccgatctcgcggactaccccgtcagctccccgcag
cgcaaactgatgaccgcgctcgccgacccgaagcgccaaccgcgattgttctaa
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