KEGG   Gemmata massiliana: SOIL9_80970
Entry
SOIL9_80970       CDS       T06634                                 
Name
(GenBank) dead deah box helicase : DEAD/H associated domain protein OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=Rcas_1024 PE=4 SV=1: DEAD: Helicase_C: DEAD_assoc
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gms  Gemmata massiliana
Brite
KEGG Orthology (KO) [BR:gms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gms03400]
    SOIL9_80970
Enzymes [BR:gms01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SOIL9_80970
    5.6.2.6  RNA 3'-5' helicase
     SOIL9_80970
DNA repair and recombination proteins [BR:gms03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SOIL9_80970
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 Asparaginase_C
Other DBs
NCBI-ProteinID: VTS00698
UniProt: A0A6P2DK06
LinkDB
Position
1:complement(8863101..8865599)
AA seq 832 aa
MRGIPKPPRPGPPKRAPIAPAEVMSPGDWFARRGWVPFPFQQEAWAAYRAGASGLIHAST
GTGKTYAAFFGELLEAVEEPLAVTPPPVRVLWVTPLRALSADTALALEAPLRPLGLNWDI
GTRTADTPTAARARQQKRLPTVLVTTPESLSLLLTYPDAREKFADLRCVVCDEWHELFGS
KRGVLTELALARLRTFRPHLRTWGLSATLGNLDDALAALIGTTNTGRVIRGHVPKPVAID
AVLPPRVERFPWAGHLGLSLLPQVVAAVEGGKSALLFTNTRGQCEQWYQALLGAKPEWAG
QVALHHGSLDRKARDWVEDGLRAGTLRCVVCTSTLDLGVDFAPVDRVLQVGSPKGVARLL
QRAGRSGHRPGETSRVTCVPTHALELVEVSAARAAAAEGRIECRFSLEKPLDVLAQHCVG
SALAGGFRADELLAEVRTARAYRGLARDEWAWVLDFVTRGGEALKAYPDYRRVVVRDGVY
AVEDARIARRHRLSVGVITSEAAVLVRFLRGPKLGALDESFAARLKPGDRFTFAGRTLEF
VKLYEMTAWVRLSKKQADTKLRWSGARLPLSGELSAAVRAKLGEGARGQFADAEMRAIRP
VLEVQARWSRVPMADEVLAERLRTRDGYHLFLYPFEGRLVHEGVAALLAYRLSLRRPQTF
ALACNDYGFELASPDPLDLGAGALKELLAPAGLAGDVLASLNAAELAKRQFREVARVAGL
VNPGLPNAGRTAKQLQASSGLFYDVFREHDPSNLLLWQARREVLDRQFEVTRLRAALDRV
AASRIVVTEPPRPTPFAFPLLVERLRESVSSEALADRVRKMAAALERKAEPE
NT seq 2499 nt   +upstreamnt  +downstreamnt
atgaggggcattccgaagccgccgcggcccggcccgccgaagcgcgcccccatcgccccg
gcagaggtgatgtcaccgggcgattggttcgcgcgccgcgggtgggtgccgttccccttc
caacaggaagcgtgggcggcctaccgcgccggcgcgagcgggctgattcacgcctctacc
ggaaccggaaagacctacgcggcgttcttcggggagttgctcgaagccgttgaggagccg
ttggcggtgaccccgccgcccgtccgcgtgctgtgggtgacgcccctccgtgcgctgtcg
gccgataccgcgctggcgctggaggcgccgctccgcccgctgggactgaactgggacatc
gggacgcgcaccgccgacaccccgaccgcggcccgcgcgcggcagcaaaagcgcctgccg
acggtgctcgtcaccacgcccgagagcctgtcgctcctgctcacctatccggacgcgcgc
gaaaaatttgcggacctgcggtgcgtggtgtgcgacgagtggcacgaactgttcggctcg
aagcgcggcgtgctgacggaactcgccctcgcccgcctccgcacgttccgcccgcacctg
cggacgtggggactgtcggccacgctcggtaacctggacgacgccctcgcggcactaatt
ggaaccacgaacaccgggagggtgatccgcgggcacgtgccgaagccggtcgccatcgac
gcggtgctgccgccgcgggtggagcggttcccgtgggccggacacctcgggctgtcgctg
ctaccgcaggtggtcgccgcggtcgaaggggggaagtcggccctgctgttcaccaacacc
cgcgggcagtgcgagcagtggtaccaggcgctcctcggcgccaaaccggagtgggccggg
caggtcgcgctgcaccacggttcgctcgaccgcaaggcgcgcgactgggtcgaggacggg
ctccgcgccggcaccctgcggtgcgtcgtctgcaccagcacgctcgacctcggagtagac
ttcgcaccggtggaccgggtgctccaggtgggcagcccgaagggggtcgcgcggctgctc
cagcgggccgggcgcagcgggcaccggccgggcgagaccagccgcgttacctgcgtcccg
acgcacgcgctcgaactggtcgaggtgtccgcggcgcgggcggccgcggccgaagggcgg
atcgagtgccggttctcgctcgagaagccgctcgacgtgctggcgcagcactgcgtcggc
tcggcgctggccggcgggttccgggccgacgagttgctcgcggaggtccgaacggcgcgc
gcctaccgcggcctggcgcgcgacgaatgggcgtgggtgctcgacttcgtcacccgcggc
ggcgaggcgctgaaagcttacccggactaccggcgcgtcgtggtgcgggacggcgtgtac
gcggtcgaggacgcgcggatcgcccgccggcaccggctgtcggtcggcgtcatcacgtct
gaggcggcggtgctggttcggttcctccgcgggccgaagttgggcgccctggacgagtcg
ttcgccgcccgtctcaaacccggcgaccggtttacattcgccgggcgcacgctggagttc
gtgaagttgtatgagatgacggcgtgggtgcggctgtccaagaaacaagcggacaccaag
ctccgctggtccggcgcgcggctgccgctgtccggcgagctgtcggcggcggtgcgggcc
aagttgggcgagggcgcccgcggccagttcgcggacgccgagatgcgggcgattcggccg
gtactggaggttcaggcgcgctggtcgcgtgtgccgatggccgacgaggttctcgcggag
cgcctccgcacccgcgacgggtaccacctgttcctctacccgttcgaggggcggctcgtt
cacgagggcgtggcggcactactggcgtaccgcctgtcgctccggcggccgcagacgttc
gccctggcgtgcaacgattacggtttcgaactggcgtcccccgacccgctcgaccttggt
gcgggcgcgctgaaggagctgctcgctcccgcggggctcgcgggcgacgtgctggcgtcc
cttaacgcggccgagctcgcgaagcgtcagttccgcgaggtggcccgcgtcgccgggctg
gtgaacccggggctcccgaacgccggtcgcaccgccaagcagctccaggcgtccagcggg
ctgttctacgacgtgttccgcgagcacgacccgtcgaacctgctcctgtggcaggcgcgt
cgcgaggtgctggaccggcagttcgaggtgacgcggttgcgcgccgcattggaccgcgtc
gccgcgagccggatcgtggtaaccgaaccgccgcggccgacgccgttcgcgttcccgctc
ctggtcgagcgattgcgcgaatcggtgtcgtccgaggcgctggccgaccgcgtgcggaag
atggccgcggccctggagcggaaggcggagccggaatga

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