Gaopeijia maritima: V3331_01990
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Entry
V3331_01990 CDS
T10606
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
gmt Gaopeijia maritima
Pathway
gmt03020
RNA polymerase
Brite
Enzymes [BR:
gmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
V3331_01990 (rpoC)
Transcription machinery [BR:
gmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
V3331_01990 (rpoC)
DNA repair and recombination proteins [BR:
gmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
V3331_01990 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WZE81792
LinkDB
All DBs
Position
480188..484483
Genome browser
AA seq
1431 aa
AA seq
DB search
MIDFPRAREQRSADFDFIQIKLASADEVRGWSYGEVTKPETINYRSFKPERDGLFCERIF
GPVKDWECHCGKFKRIRFRGHVCDRCGVEVTLSKVRRERMGHIELAVPVCHIWFFKTLPS
QLGYLLGMTLRDLEKVVYYASYVVTKPGRQDVEFLDLLDEDEYYDLRVKARDEGDDAFKA
EIGAEAVRTLLKMLDSPERKVGDRNADGRGLDRLADWLRNEIATETSQHRKKKKLKRLKV
VDALRTSGATPEERNRPEWMVMDVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNN
RLKKLIEMRAPEVILRNEKRMLQEAVDALFDNGRRSKAIRGRGKRPLKSLSDMLKGKQGR
FRQNLLGKRVDYSGRSVIVVGPELNLHQCGLPKAMAVELFKPFIIHELEKRGEAETVKRA
KKIVERDDPKVYEVLEDIIKDHPVLLNRAPTLHRLGIQAFEPVLVEGKAIRIHPLVCSAF
NADFDGDQMAVHVPLSFEAQLEARVLMLSSNNILLPSNGRPVAAPTQDMVIGSYYLTNPP
LRVKDLEQSLRSSKLPKSARQKAEEQLDAFYAEAPRFASYGEVEMALGTDRVGFQTLVWY
WWPKETDEGETTGRWLRTTAGRVLFNSIIPDEMGFLNYTFGKKELGDLVFDCFTEVGLSA
TTQFLDNLKNFGFRYSTMGGISVGIEDLEVPSEKLEILRDADEQVGRFQRAYASGYISNG
ERYNKVIDTWTHANNDVADAMVRHLERSKEGYNPVYMMMTSGARGNRDQMRQLAGMRGLM
AKPQKKLTGGIGEIIESPIKSNFREGLTVVEYFISTHGARKGLADTALKTADAGYLTRRL
VDVAQDVVVTVEDCGTILGLEMTALKEGEDIIEPLKDRIVGIVALEDVYDPIDGELLVSA
GELIVEEIADAIEDAGIQSVKIRSVLTCEAKRGICRQCYGRNLATMKMVDIGEAVGILAA
QSIGEPGTQLTLRTFHIGGTASRIAAQTQRKSKIDGVITLDRVTTVETPDESRIVTSREG
QIVLKTKEGQVRSKLSVPYGATLSVEEGQVIEAGELLFSWDPYSEPIVADEEGVVRFHDI
VEEQTMREELDESTGRRQMTIIEDRDKRLHPTIQIVAKGEKGEKLREFIVPVGAQLTVND
EDEVLPGDTLAKISREVYKTRDITGGLPRVAELFEARRPKDPAVITEIDGRVSFGDIKRG
KREVVVTPETGPARSYDVPVGKHMRVHEGDHVRAGDRLSEGPINPHDILRIKGPRAVQEY
LLNEIQEVYRLQGVKINDKHIGVIVRQMLQKVRITDPGDTHLLEGENADRSEFREVNQAA
MLDEKKPARSEPLLLGITKASLTTESFISAASFQETTRVLTDAAVRGARDDLKGLKENII
IGHLIPAGTGIHRYSEVEFMVEQSFYDEEILPLSEPGMELLEGLGSEVGVD
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattttccgagagctcgggaacagcgcagcgccgatttcgacttcatccagatc
aagctggcttcggccgacgaggtccgcggctggtcgtacggcgaggtgacgaagcccgag
accatcaactaccgttcgttcaagccggagcgggacggtctgttctgcgagcgcatcttc
ggtccggtgaaggactgggagtgccactgcggaaagttcaagcgcatccgcttccgcggg
cacgtctgcgaccgctgcggggtcgaggtgaccctgtcgaaagtccggcgcgagcggatg
gggcacatcgagctggcggtgccggtctgccacatctggttcttcaagacgcttcccagc
cagctgggctacctgctgggcatgacgttgcgcgacctcgagaaggtcgtgtactacgcc
tcgtacgtcgtcacgaagccgggtcgtcaggacgtcgagttcctcgacctcctcgacgag
gacgagtactacgacctgcgcgtgaaggcgcgggatgagggcgacgacgccttcaaggcg
gagatcggtgccgaggcggtgcggacgctgctgaagatgctcgactcgcccgagcgcaag
gtgggagaccgcaacgcggacggccggggcctcgaccgcctggccgactggctgcgcaac
gagatcgccaccgagacgagccagcaccgcaagaagaagaagctcaagcggctgaaggtg
gtcgacgcgctccgcacctccggggccacccccgaggagcgcaaccgtcccgagtggatg
gtgatggacgtggtgccggtgattccgccggatctgcgcccgctcgtgccgctcgatggt
ggccggttcgccacctccgacctcaacgacctgtaccgccgcgtcatcaaccggaacaac
cgtctcaagaagctgatcgagatgcgtgctccggaggtgatcctgcgcaacgagaagcgg
atgctgcaggaggcggtcgacgccctgttcgacaacgggcgccggtcgaaggcgatccgc
ggtcgcggcaagcgcccgctcaagtcgctcagcgacatgctgaagggcaagcaggggcgg
ttccgtcagaacctgctcggaaagcgggtggactactcgggccggtcggtcatcgtggtc
gggcccgagctcaacctgcaccagtgcggtctgccgaaggcgatggccgtggagctcttc
aagcccttcatcatccacgagctggagaagcggggcgaggccgagacggtcaagcgcgcg
aagaagatcgtcgagcgcgacgacccgaaggtctacgaggtgctcgaagacatcatcaag
gaccacccggtgctgctgaaccgggcgccgacgctgcaccgcctggggatccaggcgttc
gagccggtgctcgtggaagggaaggccatccggatccatccgctcgtctgctcggccttc
aacgccgacttcgacggagaccagatggcggtccacgtgccgctgtcgttcgaggcgcag
ctcgaggcgcgggtcctcatgctgtcgtcgaacaacatcctcctgccgtcgaacggacgg
ccggtggcggcgcccacgcaggacatggtgatcggatcgtactacctgaccaacccgccg
ctccgcgtgaaggatctggagcagtcgctgcgcagctccaagctcccgaagagcgcccgc
cagaaggcggaggagcagctcgacgcgttctacgccgaggcgccgcgcttcgccagctac
ggcgaggtggagatggcgctcggcaccgatcgggtgggcttccagacgctggtctggtac
tggtggcccaaggagacggacgagggcgagaccacggggcgctggctgcgcaccaccgcg
gggcgcgtgctgttcaacagcatcatccccgacgagatgggcttcctcaactacaccttc
ggcaagaaggagctcggggacctcgtcttcgactgcttcaccgaggtgggcctgtcggcc
accacgcagttcctcgacaacctgaagaacttcggcttccggtactccaccatgggtgga
atctcggtggggatcgaggatctcgaggtgccgtcggagaagctcgagatcctgcgggat
gccgacgagcaggtgggccgcttccagcgcgcctacgccagcggctacatctcgaacgga
gagcgctacaacaaggtgatcgacacctggacgcacgcgaacaacgacgtcgcggacgcc
atggtgcgccacctcgagcgctcgaaggaagggtacaacccggtctacatgatgatgacg
tcgggcgcgcgaggtaaccgcgaccagatgcgtcagctggccggcatgcgcggcctgatg
gccaagccgcagaagaagctgaccggaggcatcggcgagatcatcgagagcccgatcaag
tcgaacttccgcgaagggctcaccgtggtggagtacttcatctccacccacggcgcgcgg
aagggtctggccgacaccgccctgaagacggccgacgccgggtacctcacgcgccggctg
gtcgacgtggcgcaggacgtggtggtcacggtcgaggactgcggcaccatcctcgggctc
gagatgacggccctgaaggagggcgaggacatcatcgagccgctgaaggaccgcatcgtc
ggcatcgtggccctcgaggacgtctacgatccgatcgacggtgagctgctggtcagtgcc
ggcgagctgatcgtcgaggagatcgccgacgcgatcgaagacgccgggatccagtcggtc
aagatccgctcggtgctcacctgcgaggccaagcggggcatctgccgccagtgctacggc
aggaacctggccaccatgaagatggtcgacatcggagaggcggtcggaattctggcggcg
cagtcgatcggtgagcccggcacgcagctcaccctgcggaccttccacatcggtggtacc
gcgtcgcgcatcgcggcgcagacgcagcgcaagtcgaagatcgacggtgtgatcactctc
gaccgcgtcaccacggtcgagacgcccgacgagtcgcggatcgtcacctcgcgagagggt
cagatcgtcctcaagacgaaggaaggtcaggtccgctcgaagctctcggtgccgtacggc
gccacgctctccgtggaggaggggcaggtgatcgaggccggtgagctgctcttcagctgg
gacccctactcggagccgatcgtggccgacgaggagggtgtggtccgcttccacgacatc
gtcgaggagcagaccatgcgcgaggagctcgacgagtccaccggtcgtcgccagatgacg
atcatcgaggatcgtgacaagcgcctccacccgacgatccagatcgtcgccaagggcgag
aagggcgagaagctgcgcgagttcatcgtgccggtgggcgcgcagctgaccgtgaacgac
gaagacgaagtgctgccgggtgacaccctcgcgaagatcagccgcgaggtgtacaagacg
cgcgacatcaccgggggtctgccccgggtggccgagctcttcgaggcgcggcgcccgaag
gatcccgccgtcatcaccgagatcgacggtcgggtctcgttcggcgacatcaagcgaggc
aagcgcgaagtggtcgtcacgccggagacgggtcccgcccgctcctacgacgtgccggtc
ggtaagcacatgcgcgtgcacgagggcgatcacgtgcgtgccggagaccgcctcagcgag
ggtccgatcaacccgcacgacattctgcgaatcaaggggccgcgggccgttcaggagtac
ctgctgaacgagatccaggaggtctaccgactccagggtgtgaagatcaacgacaagcac
atcggcgtgatcgtgcggcagatgctgcagaaggtgcgcatcaccgacccgggcgacacc
caccttctcgagggtgagaacgccgatcggtcggagttccgcgaggtcaaccaggccgcg
atgctcgacgagaagaagccggctcgctccgagccgctcctgctcggcatcacgaaggcg
tcgctgacgaccgagtcgttcatctcggccgcctccttccaggagacgacccgggtgctg
accgacgccgcggtgcgcggcgctcgggacgacctgaaggggctgaaggagaacatcatc
atcggtcacctgattccggccgggaccggcatccaccggtactcggaggtggagttcatg
gtggagcagtcgttctacgacgaggagatcctcccgctctcggagccgggcatggagctt
ctcgagggactggggtcggaggtgggcgtcgactga
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integrated database retrieval system
