Gaopeijia maritima: V3331_03360
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Entry
V3331_03360 CDS
T10606
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gmt Gaopeijia maritima
Pathway
gmt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V3331_03360 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmt03019
]
V3331_03360 (pnp)
03016 Transfer RNA biogenesis [BR:
gmt03016
]
V3331_03360 (pnp)
Enzymes [BR:
gmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
V3331_03360 (pnp)
Messenger RNA biogenesis [BR:
gmt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
V3331_03360 (pnp)
Transfer RNA biogenesis [BR:
gmt03016
]
Prokaryotic type
tRNA degradation factors
V3331_03360 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
WZE82061
LinkDB
All DBs
Position
758268..760421
Genome browser
AA seq
717 aa
AA seq
DB search
MIKRIERQFAGRPLTLEIGRMAKLAGGSCLVQYGETVVLCTATAQSKPTHLPFFPLTVEY
REKTYAAGKIPGGFFKREGRPGEKEILAARLTDRPLRPLFPDGFMHETQVVANILSADQE
NDADVLALLGGSVALNMSNIPFNTPVASVRVGRIQGTWVWNPTFQQLEYSDVDMVVAGSE
DAILMVEGGAIEVPEADMLEGIQFAHEGIKQLVEIQKELLEGHSVPDMEWTPVAPDADLE
SVVEKVAAAKVVEALNLSDKQERQQAMAAVKEDVISHLQDDDEDWAEHEGQVGDILRAIE
KRTMRQQILDNGERADGRNLDEIRPISCEVGVLPRTHGSALFTRGQTQALAVTTLGTSRD
EQRIDSIDVREEVTKSFMLHYNFPPFSVGEARPFRSTSRREIGHGNLAERAIQPLLPAYD
EFPYTIRIVSDILESNGSSSMASVCGASLSLMDTGVPIKAACAGVAMGLIKEGDKVAVLT
DILGLEDALGDMDFKVAGTRDGVTSIQMDIKIAGLTTEILEEALKRAHAGRMHILDIMDQ
TLAEPRVDISQWAPRITTIQINPEKIGEIIGPKGKTIRAIQDESGATIEVDDSGLVKIAA
VSGEGADRAREMIEAIVKDPEVGRIYEGPVKNTTTFGAFIEILPGVEGLCHISELEDGRV
EKTEDVLKKGDITRVKLLSIDEKGRLRLSRRAALAEDAQAADEGDAEGGDAEGGDDS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcgcatcgagcgccagttcgcagggcgccccctcactctcgagatcggtcgg
atggccaagctcgcggggggttcctgcctcgttcagtacggtgagacggtggtgctctgc
acggccacggcccagagcaagccgacccacctccccttcttcccgctcaccgtcgagtac
cgcgagaagacctacgccgccggaaagatccccgggggcttcttcaagcgcgagggtcgc
cccggtgagaaggagattctcgccgcgcgcctcaccgaccgcccgctgcggccgctcttt
cccgacggcttcatgcacgagacgcaggtggtcgccaacatcctgagcgccgatcaggag
aacgacgccgacgtgctcgccctgctgggcggcagcgtggcgctcaacatgtcgaacatc
cccttcaacaccccggtcgcctcggtgcgcgtggggcggatccaggggacgtgggtgtgg
aacccgaccttccagcagctcgagtactccgacgtcgacatggtcgtcgccggatccgag
gatgcgatcctgatggtcgagggcggcgcgatcgaggtgcccgaggccgacatgctcgag
ggcattcagttcgcgcacgagggcatcaagcagctcgtcgagatccagaaggagctgctc
gagggccactcggtgcccgacatggagtggacgccggtcgcgcccgatgccgacctggag
tcggtggtggagaaggtggcggcggcgaaggtggtcgaggccctcaacctgtccgacaag
caggagcgtcagcaggcgatggcggccgtgaaggaggacgtcatcagccacctgcaggac
gacgacgaggactgggccgagcacgagggccaggtgggcgacatcctgcgcgcgatcgag
aagcgcacgatgcgtcagcagatcctggacaacggcgagcgcgccgacggccgcaacctc
gacgagatccgtccgatctcgtgcgaggtgggcgtgctgccgcgcacccatggctccgcc
ctcttcacccgcgggcagacgcaggccctcgcggtgaccacgctgggcacctcgcgcgac
gagcagcggatcgactcgatcgacgtccgtgaagaggtgaccaagtcgttcatgctgcac
tacaacttcccgccgttctcggtgggtgaggcgcggcccttccgcagcacctcgcgccgc
gagatcgggcacggcaacctggccgagcgggccatccagccgctgctcccggcctacgac
gagttcccgtacacgatccgcatcgtctccgacattctcgagtcgaacggctcgtcgtcg
atggcctcggtgtgcggcgcctcgctctcgctcatggacaccggcgtgccgatcaaggcc
gcctgtgcgggtgtggcgatggggctgatcaaggaaggcgacaaggtggccgtgctcacc
gacatcctcggtctcgaggacgccctcggcgacatggacttcaaggtggccggtacgcgc
gacggcgtgacctcgatccagatggacatcaagatcgccggtctcaccaccgagatcctc
gaggaggcgctgaagcgggcccacgccggccgcatgcacattctcgacatcatggatcag
acgctggccgagccgcgggtcgacatctcgcagtgggccccgcggatcaccacgatccag
atcaaccccgagaagatcggcgagatcatcggaccgaagggcaagacgatccgcgccatc
caggacgagtcgggtgccaccatcgaggtggacgactccggtctggtgaagatcgcggcg
gtgagcggcgagggtgcggatcgcgcccgcgagatgatcgaggcgatcgtgaaggacccc
gaggtgggccggatctacgagggcccggtgaagaacaccaccaccttcggcgccttcatc
gagatccttcccggcgtggaggggctctgccacatctccgaactcgaggacggccgggtc
gagaagaccgaggacgtgctcaagaagggagacatcacccgggtgaagctgctgtcgatc
gacgagaagggccgtctgcgcctctcccgtcgggccgcgctcgccgaggacgcccaggca
gccgacgaaggcgacgccgagggtggcgacgccgagggtggcgacgattcctga
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