KEGG   Gaopeijia maritima: V3331_04930
Entry
V3331_04930       CDS       T10606                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
gmt  Gaopeijia maritima
Brite
KEGG Orthology (KO) [BR:gmt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmt03400]
    V3331_04930
Enzymes [BR:gmt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     V3331_04930
    5.6.2.6  RNA 3'-5' helicase
     V3331_04930
DNA repair and recombination proteins [BR:gmt03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    V3331_04930
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WZE82361
LinkDB
Position
complement(1145089..1147551)
AA seq 820 aa
MSAGVDALERWFAERGWRPFGFQREVWRAWSEGESGLLHVPTGLGKTVAAAGGPLGAAVE
APEDDASGLRLLWITPLRALARDTETALSELTAGLGLDWRVERRTGDTAAALKRRQKTHP
PEVLITTPESLSLLLTETRHPRIFAALDTVVVDEWHELLGSKRGVQCELGLARLRTLRPD
LRTWGLSATLQNLHEAQNTLLGPGAGGRLVGAGDDVPSGAIELRTVLPDPAGPDRFPWAG
HLGLRLLEPVLAELDAPGTALLFTNTRSQAELWHRAIVEARPDWADDVLLHHGSLAREAR
TAAEERLRLGTARCVVCTSTLDLGVDFSPVDRVIQVGSPKGVARLLQRAGRSGHRPGGVR
RIVCVPTHALEIVEFAAARTSIEAGSVEPRHPLVGALDVLCQHLVTRALGGGFTRAEIAA
EVRSTRAYRDLADSALDWCLDFVTRGGATLEAYPRYHRVVRAGDRFVVESRSVARRHRMS
VGTITDDGQMQVRFLKGGRLGRVEERFVSRLSPGDRFLFAGRELELVRTRDMVAWVRLAK
GRKARRPVPRWAGGRMPLSTHLAEAVAAALSGSGSQHTPEMAAVAPLLEVQARWSRLPGH
AHLLGERHRTREGHHLFLFPFLGRAAHEGLAALVAWRLSQRAPRTASVSANDYGFEIVSP
DPLPDDPGEWVPLWSPDRLIDDLHACMNATELARRRFRDVARVSGLVFQGPPGRPKSARQ
LQASAGLIYDVLARWDPENLLLQQAHREVLDHELEVRRLREGLERMTALPPVFTTPPRLT
PLAFPIWAERMQAQVSTESWVDRVRRVAGRLEKAAGTAGA
NT seq 2463 nt   +upstreamnt  +downstreamnt
gtgagcgcgggtgtcgacgcgctcgagcggtggttcgccgaacgcgggtggaggccgttc
ggatttcagcgcgaggtgtggagggcctggtcggaaggcgagagcggccttctgcacgtg
cccaccgggctcggcaagacggtggcggcggcgggcggacccctcggggcggcggtcgag
gcccccgaagacgatgcgtcggggctgagactgctctggatcaccccgttgcgtgccctc
gctcgcgacaccgagacggcgttgtcggaactgacggccgggctgggcctcgactggcgg
gtcgagcgccgaaccggcgacaccgccgccgccctgaagagacgccagaagacccacccg
ccggaggtgctgatcaccactccggagtcgctctcgctcctgctcacggagacgcggcat
ccccgcatcttcgccgcgctcgacacggtggtggtcgacgagtggcacgagctgctcggc
agcaagcgcggggtgcagtgcgaactggggctcgcccgcctccgcacgctgcgccccgat
ctccgcacgtggggcctctcggccacgctccagaatcttcacgaggcgcagaatacgctg
ttgggccccggagcgggcggtcggctcgtgggagccggcgacgacgtgccctcgggggcg
atcgaactgcgcaccgtgctccccgaccccgcgggcccggaccggtttccgtgggcgggg
catctcgggctccggttgctggagccggtgctcgccgaactcgacgcaccgggcaccgct
ctgctcttcaccaacacccgctcgcaggccgagctctggcaccgggccatcgtcgaggcg
cgtccggactgggccgacgacgtgctgcttcaccatggctcgctcgcccgcgaggcgcgc
acggcggccgaagagcgactccgtctgggcacggcccgctgcgtggtgtgcacctccacc
ctcgacctgggcgtcgatttctcaccggtggatcgcgtgattcaggtcggcagcccgaag
ggggtggcgcggcttctacagcgggccgggcgcagtggccaccgccccggcggcgtgcgc
cgaatcgtgtgcgtgcccactcacgcgctggagatcgtggagttcgcagccgcccggacc
tccatcgaggcgggctcggtggagccgcgacatcctctggtgggtgcgctcgacgtgctg
tgccagcacctggtcacccgggcgctgggcggaggcttcacacgggcggagatcgccgcg
gaggtgcggagcacccgtgcctaccgagacctcgccgactcggcgctcgactggtgtctc
gacttcgtcacgcgcgggggagcgacgctcgaggcctaccctcgctaccaccgggtggtg
cgcgccggcgaccgcttcgtggtggagtcgcgatccgtggcgcgtcgacaccgcatgtcc
gtcggcacgatcaccgacgacggtcagatgcaggtccgctttctcaagggaggtcggctc
ggccgggtggaggagcgtttcgtctcgcggctctcgcccggcgatcggtttctcttcgcc
ggccgggaactcgaactcgtgcgcacccgtgacatggtcgcctgggtgcgcctggcgaag
gggcggaaggcgcgccggcccgtgccgcgctgggcggggggccgcatgccgttgtccacg
cacctggcagaggcggtggccgcggccctgtccggctcggggtcgcagcacacgccggag
atggcggccgtggccccgctgctcgaggttcaggcgcgatggtcgagactgcccggccac
gcccatctgctcggagagcggcaccgcacgcgcgaggggcaccacctctttctctttccc
ttcctgggccgcgcggcccacgaggggttggcggcgctggtggcctggcggctgtcgcag
cgcgcccctcgcacggcctcggtgtcggccaacgactacgggttcgagatcgtctcgccc
gatccccttccggacgatccgggcgagtgggtcccgctgtggagccccgaccgcctgatc
gacgatctgcacgcctgcatgaacgccacggagctggctcggcgccgctttcgcgacgtg
gctcgcgtgtcgggactggtgtttcagggccccccgggacgtccgaagtcggcgcggcag
cttcaggcgtcggccgggctgatctacgacgtgctggcccgctgggatcccgagaacctc
ctgctccagcaggcgcatcgagaggtgctcgaccacgagttggaggtacggcggctccgc
gaggggctcgagcggatgaccgcgctgccgccggtcttcaccaccccgccccgtctcacc
cctctggcgtttccgatctgggcggagcgcatgcaggcgcaggtgagcaccgagtcgtgg
gtggaccgtgtgcgccgggtggcgggtcgcctggagaaggccgccgggacggcgggggcc
tga

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