Gaopeijia maritima: V3331_10365
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Entry
V3331_10365 CDS
T10606
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gmt Gaopeijia maritima
Pathway
gmt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V3331_10365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmt03400
]
V3331_10365
Enzymes [BR:
gmt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
V3331_10365
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
V3331_10365
DNA repair and recombination proteins [BR:
gmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V3331_10365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Prolactin_RP
Motif
Other DBs
NCBI-ProteinID:
WZE79885
LinkDB
All DBs
Position
complement(2344942..2345889)
Genome browser
AA seq
315 aa
AA seq
DB search
MPELPEVSAYLDAFRERIVGEVLQGVRLRSPSLLRTFDPPLSAAAGRTVREVGRMGKRIV
WSLDGDLHLVVHLMVTGRFHRRRPGTALPKKHAHASFDFADASYFLTERGKQKKASLHLV
QGAEALAALDPGGLEPLEASPEAFAAALRRENRTLKRALTDPRILSGIGNAHSDEILWQA
GLSPVQRTGNLDDDELERLRVATVDGLLEWTARLAGENAGRFPEKITAFHPAMAMHGRYG
EPCPRCGDPVQRIVYAERETNYCATCQTGGRLLADRAFSRLLREDWPRTLDELENHLNER
RSPSVDGDPAQDAAP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactccccgaggtgagcgcctacctcgacgccttccgcgagcgcatcgtgggc
gaggtgctccagggagtgcggctgcgctccccctcgctgctgcgcactttcgatccgccg
ctgtcggcggcggccgggcgcacggtccgcgaggtggggcgcatgggcaagcgcatcgtc
tggtcgctggacggcgatctgcacctcgtggtccacctcatggtcacgggtcgattccac
cgcaggcgacccggcaccgcgctgccgaagaagcacgcccacgcctccttcgatttcgcc
gacgcgagctacttcctcaccgagcggggcaagcagaagaaggcgtcgctgcatctggtg
cagggcgccgaggcgctggcggccctcgaccccgggggcctggagccgctggaggcttct
cccgaggccttcgccgccgcccttcggcgggagaaccgcaccctgaagcgggcgctcacc
gacccgaggatcctgagcgggatcggcaacgcccactccgacgagattctctggcaggcc
gggctgtcgccggtccagcgcaccggcaatctcgacgacgacgagctcgagcgactccgc
gtggccacggtcgacggtctgcttgagtggacggcccgtctggcgggagagaacgccggt
cgctttccggagaagatcaccgccttccatccggccatggccatgcacggacgctacggc
gagccctgcccgcggtgcggcgacccggtgcagaggatcgtgtacgcggagcgcgagacc
aactattgtgccacctgtcagaccggcgggcggctgctcgccgatcgggccttcagtcgg
ctgctgcgcgaggactggccgcgcaccctcgacgaactcgagaaccacctcaacgagcgg
cggagtccgtcggtggacggcgaccccgctcaggatgccgcaccatga
DBGET
integrated database retrieval system
