Gaopeijia maritima: V3331_12920
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Entry
V3331_12920 CDS
T10606
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gmt Gaopeijia maritima
Pathway
gmt03030
DNA replication
gmt03410
Base excision repair
gmt03420
Nucleotide excision repair
gmt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V3331_12920 (polA)
03410 Base excision repair
V3331_12920 (polA)
03420 Nucleotide excision repair
V3331_12920 (polA)
03440 Homologous recombination
V3331_12920 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmt03032
]
V3331_12920 (polA)
03400 DNA repair and recombination proteins [BR:
gmt03400
]
V3331_12920 (polA)
Enzymes [BR:
gmt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V3331_12920 (polA)
DNA replication proteins [BR:
gmt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V3331_12920 (polA)
DNA repair and recombination proteins [BR:
gmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
V3331_12920 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V3331_12920 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
DprA_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WZE80370
LinkDB
All DBs
Position
complement(2932996..2935776)
Genome browser
AA seq
926 aa
AA seq
DB search
MEIPPKTRPRLFLIDAYALIYRSYFAFIRRPLMNSRGENTSAPFGFTNFLEQLKTDFDPE
YLAVVFDAGDSFREEIFPDYKATREKMPDDLRASIPRVRAIVEGFRDPVIELDGYEADDV
IGTLARKADAAGLEAVIVSGDKDFYQLVDDHVHLLNPGRGGPNGVDADWVDLRNADEKFG
IPPSQVIDYLALIGDSSDNVPGAPGIGPKTAVKLLQQFGDVESILAAAPELKAKRSRESL
TENADSVRMSRELVTIKTDLPVDLDLDRLKVGEPDFAELRDLFLDLEFRRLAEKYTRGAL
EADAIESAAAREATYRTLTSVEQVAEWVEQARAEGRVAVGVEASLPDPMRGRLIGMALSA
ADGNAVYLPFDHHATAALELDLGDPTEPVPNLPPLSDPAMAPLRHLLADPEVALVGHDLK
TTLLLLKRAGSPLGGGLRDAMVASYVLDPGRRSHDLDALAMEILAHRTTPRDEVVGKGRQ
RIGFAEVALDAARDHACERVDCAWRLWSRFEPELEEYALLPLFDDLEMPLVPVLARMEER
GIRVDTEVLHEMSTKLRGELALIEEEIYKLAGMEFNLNSTPQLREVLFDRLELPVLKKTK
TGPSTDASVLEELAADGHEVPRLMLEYRELEKLRNTYVDALPRLVHRTTGRIHTSFNQTV
AATGRLSSSDPNLQNIPIRTALGREVRKAFVADQGFQLLGVDYSQIELRVLAHFSGDAPL
VEAFRKGIDVHRQTAAVIFDVDIEEVGAAQRAQAKTINFATLYGQGAFSLARQLGISREM
AQSFIDQYFERFRGVRAFLDAQVEQAKEKGYVTTLLGRRRYVPELKSRNWNVRQFGERVA
QNTPIQGTAADMIKKAMLEVDEGLESGGFGARMLLQVHDELLFEVPVEEMDSVRELVVSR
MEGAMALEVPLVAEWGVGDSWYDAKG
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
gtggagatccctccgaagacccgtccccgcctcttcctgatcgacgcctacgcgctcatc
taccgctcgtacttcgccttcatccggcgcccgctgatgaactccaggggggagaacacc
tcggcgcccttcggcttcaccaacttcctcgagcagctgaagacggatttcgatccggag
tatctggcggtggtgttcgatgcgggggactcctttcgggaggagatcttcccggactac
aaggccacccgcgagaagatgcccgacgatctccgggcctcgatcccgcgggtgcgggcg
atcgtcgagggctttcgcgatccggtgatcgaactggacggctacgaggccgacgacgtg
atcggtacgctcgcgcgcaaggccgacgcggcgggcctcgaagcggtgatcgtgtcgggc
gacaaggatttctaccagctcgtggacgaccacgtgcacctgctcaaccccgggcgcggc
gggcccaacggggtggatgccgactgggtggatctccgcaacgccgacgagaagttcggg
attccgccgtcgcaggtgatcgactacctggcgctcatcggcgactcgtcggacaacgtt
ccgggagcgccgggcatcgggccgaagaccgccgtgaagctgctccagcagttcggcgac
gtggagtcgattctcgcggccgcccccgagctcaaggcgaagcgctcgcgagagtcgctc
accgagaacgccgactcggtgcggatgtcgcgcgaactggtcacgatcaagaccgatctg
cccgtcgacctcgacctcgaccggctgaaggtgggcgagcccgacttcgcggagctgcgc
gacctctttctcgacctcgagtttcggcggctcgccgagaagtacacgcggggcgcgctg
gaggccgatgcgatcgagagcgccgcggcgcgcgaggccacctaccgcaccctcacctcg
gtcgagcaggtggcggagtgggtggagcaggcgcgtgcggaggggcgcgtggccgtgggt
gtggaggcctccctgcccgatcccatgcgcgggcggctgatcggcatggccctgtcggcg
gccgacggcaatgcggtgtacctgcccttcgaccaccacgccacggcggcgctcgagctc
gacctcggcgacccgacggagccggtaccgaatctgccgccgttgagcgacccggcgatg
gcgccgctgcgccatctcctcgccgatcccgaggtggcgctggtggggcacgacctcaag
accaccctcctgctgctgaagcgggccgggagcccgctgggaggcgggctgcgcgacgcg
atggtcgcctcgtacgtgctcgatccggggcggcggtcgcacgacctcgacgccctcgcg
atggagatcctggcgcaccgaaccaccccgcgtgacgaggtggtgggcaaggggcggcag
cgcatcggcttcgccgaggtggccctcgacgccgcgcgggatcacgcctgcgagcgggtg
gactgcgcctggcgactgtggagtcgcttcgagcccgaactcgaagagtacgccctgctg
ccgctcttcgacgatctcgagatgccgctggtgccggtgctcgcccgcatggaggagcgc
gggattcgggtcgacaccgaggtgctgcacgagatgtcgacgaagctgcgcggcgaactc
gcgctgatcgaggaggagatctacaagctggcgggcatggagttcaacctgaactccacc
ccccagctgagggaggtgctcttcgaccgcctggagctgccggtgctcaagaagacgaag
accgggccgtcgaccgacgcctcggtgctcgaggagctggcggccgacggccacgaggtg
ccgcgtctcatgctggagtaccgcgaactcgagaagctgcgcaacacctacgtcgacgcc
ctgcctcggctggtgcatcgcaccaccggccggatccacaccagcttcaaccagacggtg
gcggccaccgggcgcctgtcgtcgtccgaccccaacctgcagaacataccgatccgcacc
gccctcgggcgcgaggtgcgcaaggcattcgtggccgaccaggggttccagctgctggga
gtcgactactcgcagatcgagctgcgcgtgctggcgcacttctccggcgatgcccccctg
gtggaggccttccggaagggcatcgacgtgcatcgtcagacggccgcggtgatcttcgac
gtcgacatcgaagaggtgggcgcggcccagcgggcccaggcgaagacgatcaacttcgcc
accctctacggccagggcgccttctcgctcgcccgtcagctcggcatctcgcgcgagatg
gctcagagcttcatcgaccagtacttcgagcgcttccggggggtgcgagcctttctggac
gctcaggtggagcaggcgaaggagaagggctacgtgaccaccctgctcggtcggcggcgc
tacgtgcccgagctcaagtcgcgcaactggaacgtgcgacagttcggcgagcgggtggcg
cagaacacgcccattcagggcaccgcggccgacatgatcaagaaggccatgctcgaggtg
gacgagggcctcgagagcggcggcttcggggcccgcatgctcctgcaggtgcacgacgaa
ctgctcttcgaggtgccggtggaggagatggactccgtccgggagctggtggtgtctcga
atggagggggcgatggcgctcgaggtgccgctggtggccgagtggggggtgggcgacagc
tggtacgacgccaagggctga
DBGET
integrated database retrieval system
