Girardinichthys multiradiatus (darkedged splitfin): 124855141
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Entry
124855141 CDS
T08099
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03022
Basal transcription factors
gmu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124855141 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
124855141 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124855141 (mnat1)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124855141 (mnat1)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124855141 (mnat1)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124855141 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-UDP
TRAF3_RING
zf-RING_2
zf-P11
zf-RING_6
AIF-MLS
Motif
Other DBs
NCBI-GeneID:
124855141
NCBI-ProteinID:
XP_047200678
LinkDB
All DBs
Position
19:complement(8485495..8525087)
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFARGSGSCMQCDTPLRKSNFRV
QLFEDATVDKEVEIRKKVMKIYNKREFNFSSLRDYNDYLEQVEDIVYNLTNNIDVENTKL
RMEQYQRENKDIIQRNKAKLTREQEELEELLLQEQQSNEQRRLEVLQEEQRQLQAKRKSK
QALLDELEQSELPATILLAQHKVRAAQLETQIEQQKQNVKPTTRFGIQIGQTVSLQPVPR
IQEVLYQYKPLQVETYGPPAPDLEQLSRFGYLNHVRAAMPQDTAGGYTSALACYRAIQDA
FSGLFPLKG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagggctgtccgagatgcaaaaccaccaagtacaggaacccgtccctgaag
ctgatggtgaacgtctgcggccacacactatgcgagaactgtgtggagatgctgttcgcg
cgcggctcggggagctgcatgcagtgcgacacgcctctgaggaagagcaactttcgtgtg
cagctcttcgaagatgcaactgtggacaaggaggtagagatccgcaagaaggtgatgaaa
atctataacaagagagaattcaacttctccagcctgagagactataacgactatctggaa
caggtggaggacatagtttacaacctgacaaacaatattgatgtggagaacaccaagctg
aggatggagcagtaccagagagaaaacaaagacatcatccagagaaataaggcgaagctt
acgcgggagcaggaagagctggaggagctgctgcttcaggagcagcagagcaacgagcag
cggcggctggaagtgctgcaggaggagcagaggcagctgcaggccaagcggaagagcaaa
caggctctgctggatgaactggagcagtctgagcttcctgccaccatcttactcgctcaa
cacaaagttcgtgccgcccagctggaaacacagatagagcagcaaaaacagaatgtgaag
ccaaccactcgttttggaatccaaataggtcagactgtctctctccagcctgtgcccaga
atacaggaggttctgtaccagtacaaaccccttcaggttgaaacctatggacctccggcg
ccggacctggagcagctgagtagatttgggtatctgaaccacgtccgggccgccatgccg
caggacacagctggaggatacacctcagctctggcttgttatcgggccatccaggatgct
ttcagtgggctgttccccctgaaaggctga
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