Girardinichthys multiradiatus (darkedged splitfin): 124855164
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Entry
124855164 CDS
T08099
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124855164
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124855164
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_9
PAS_4
HLH
EOS1
Motif
Other DBs
NCBI-GeneID:
124855164
NCBI-ProteinID:
XP_047200726
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All DBs
Position
19:40397284..41011159
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AA seq
1057 aa
AA seq
DB search
MIRIFPDFSVQVTASATGGVGSGGGGGGAAGMVTGPPVGRVPVPIPGATNGTPQGVQGIS
AYQQSDPYWERPSNAGSCSNTRPKTLHLAGQQHTSSPWLQALRKEKSRDAARSRRGKENF
EFYELAKMLPLPGAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKA
IGSQRRRSPSAIASEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVEL
TGSSVFDYVHPGDHVETAEQLGMKLPPGRGMSLSQGGVSEDGASSGSSSSHSETPEPVES
SSPSLLSPDNSLERSFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHTRSVPNQ
IMGMVVVAHALPPPTINEVRIDCQMFVTRVNMDLKIVYCENRISDYMDLTPVDIVGRRCY
QFIHAEDVEGIRQSHLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNSSEKNII
WVNYVLSNLEYKDTPIDISQLPNLPEKASESSETSDSESESKENSDNENVKSEGKSGHQA
EHREDPEADSKHQQQPGQSHCSSEEIKNHDGDSSSNPESQDSDESLEPSDGEQEPEQEVA
RGEGGGLESRLGRLAGLGALEGLNTISGLGNLGGLHIKVEHYGEGEDELHSSQMSSSEED
EDVNEVEDGGIQKCDDAGISSKLQKRRKRRKVQKWDGSRSRRLRLSPTPHSPVAIGNSTP
QANPSGTTSVTSTQLLTSSDSPNSTGATSSVLKIKTEMVEPINFDNDSSIWNYPPNREIS
RNESPYSMTSKPPAPGNHETFPSPQGGSLQVAIPDSVLTPPGPDGAAGGLRKPPYNGNPA
SSSSSSATSLAPPSNPSSVGPLSPPLSASPREKQQGTPTTSSNSSSSSSSSSSSSSSLLY
SGDLEALQRLQAGNVVLPLVHRVTGTLSSTSTTAPRVYTTGTIRYAPADVTLAMAQGNLL
PNAAMNFVESSGFGLDPKTPMEMLYHHVHRLNMSAAAAAGPFVGSPAPTVGNGTLGGQMS
ATANVFTTAEGLFSTLPFPVYSNGIQTTQTTLQRKED
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgtccaggtgacggcctcggcaaccggaggagta
gggtctggcggtggaggaggtggagccgctgggatggtgactggaccccctgtaggtcgg
gtgccggttccgatacccggagccacaaacgggactccacagggtgtccaaggaatttca
gcataccagcaaagtgacccctactgggagcggccgtctaatgcaggcagctgctcgaat
acccggcccaagacccttcacctggctggccaacagcatacctcctcaccatggctacag
gctctccggaaagaaaagtcaagggatgctgcacggtcacggcgggggaaagagaacttt
gagttctatgaattagccaagatgctgccgctgcctggtgccatcaccagccaactggac
aaggcttccatcatccggctcacaatcagctacctgaagatgagggactttgccaaccag
ggggacccgccatggaacctgcgaattgagggacccccacccaacacctcagtgaaagct
atcggtagtcagcggaggaggagtcccagtgccattgcctctgagatcttcgaacctcac
ctgggtagccacattttacagtcactggacggttttgtatttgcactaaacaaggaagga
cgtttcctctacatctccgagactgtttccatttacctgggattgtcacaggtggagctg
acaggaagcagtgtatttgactatgtacaccctggtgatcatgtggagacggcagagcag
cttggcatgaaacttccaccagggagagggatgtctctgtcccagggaggtgtcagtgaa
gacggggcatcctctggttcatcgtcatcacactccgagacgcctgaaccagtggagtcc
agcagtcccagtcttctgtctcctgataactctctggaacgatccttcttcatccgtatg
aagtctactcttacaaagagaggtgtgcacatcaagtcctcaggatataaggtgatccac
atcacagggcgtctgcggatcaggatggctctgacgcacacccgctcagtgcctaatcag
atcatgggaatggtggtggtagctcacgccctcccaccacccacaattaatgaggttcgc
attgactgccaaatgtttgtcaccagagtcaacatggacctcaaaattgtctactgtgag
aacagaatcagtgattatatggacctgactccagtggacattgtagggagaaggtgctac
caattcattcatgcagaagacgtagaggggatcagacagagtcacctagacttgatgaat
aaaggtcagtgtgtgacaaagtattatcggtggatccagaagaacggtggttacatctgg
atacagtccagtgccaccattgctattaatgccaagaattccagtgagaagaacatcatt
tgggtcaactatgtcctcagtaatcttgagtataaagacacacccattgacatttcccag
ttgccaaatcttccagagaaagcatctgagtcctctgaaacctccgactctgagtctgag
tccaaagaaaactcagacaatgaaaatgtaaagtccgagggaaagtcaggccaccaagca
gaacacagggaagatccagaagcagacagcaagcatcagcagcaacctggccaatcacat
tgctcatccgaggaaataaagaaccacgatggagacagttcaagtaaccctgaaagtcag
gacagcgatgagagtcttgagccttcagatggagaacaggagccggagcaggaagtggcc
cgaggagagggaggaggacttgaaagcaggttggggagattagctggactgggagcattg
gaaggacttaataccatcagtggactgggtaatttgggagggcttcatattaaggtagag
cactatggagaaggagaggatgaactccacagctcacaaatgtcctcatcagaggaagat
gaggatgttaatgaagtagaagatggaggaatacaaaaatgtgatgatgctggtattagt
agcaagcttcagaaaaggcggaaaaggagaaaagtgcaaaaatgggatggatcacgaagc
agaaggcttcgtctgtccccaactccacacagccccgtagcaataggcaattctacacca
caggccaatccctcagggaccacctctgtcacttccacacagcttctaacttcctctgac
tccccaaacagcacaggggctacatcctctgtcctgaaaataaaaacagaaatggtagag
ccaataaactttgacaatgacagcagcatctggaactaccccccgaacagagagatttcc
agaaatgagtctccatatagtatgacctcgaagcctcctgctccagggaatcacgagact
ttcccatcaccacagggcggttctctacaggtagccattcctgactcagtcctcactcct
cctgggcctgatggggcagcaggaggattaagaaagcctccttacaatggaaatcctgcc
tcatcatcttcttccagtgctacaagtttagctcctccgtccaacccttcctctgttggc
cccctttcacctcccctttctgcatcccctcgggagaaacaacaaggcactcctacaacc
tcttcaaattcttcctcatcatcctcttcatcttcaagctcctcttcttcactgctgtat
tctggtgatcttgaagcacttcagcgtttacaggccggtaatgtggtccttccgctggtt
caccgggtcacaggaacactgtcttctaccagcaccacagctccacgtgtctacacgact
gggaccataaggtatgcgccagcagatgtcactctagccatggcacaggggaacctcctt
cccaatgctgccatgaactttgtcgagagctcagggtttggtctggaccctaagacgcct
atggagatgctctatcatcatgtccacaggctaaacatgtctgctgcagcagctgcaggc
ccatttgttggatccccagcacccacagttggtaatggcaccttgggaggccagatgtca
gctacagccaatgtttttaccacagcagagggacttttctcgacactaccattcccagta
tacagtaacgggatccagactacacagacaactctgcaaagaaaggaggactaa
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