Girardinichthys multiradiatus (darkedged splitfin): 124855323
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Entry
124855323 CDS
T08099
Symbol
srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124855323 (srrm1)
03015 mRNA surveillance pathway
124855323 (srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124855323 (srrm1)
03041 Spliceosome [BR:
gmu03041
]
124855323 (srrm1)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124855323 (srrm1)
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124855323 (srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
124855323
NCBI-ProteinID:
XP_047201036
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Position
19:18165738..18180533
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AA seq
853 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLDKKVDMTKVNLEVIKPWITQRVTEIL
GFEDDVVIEFIFNQLEEKHPDSKMMQINLTGFLNGKNAREFMKDLWPLLLSAQENIAGIP
SAFLEQKKEEIRQRQIEQEKLASLKKVDQDKKDKDTRERTRSKSPRRWKTRSPGKRERKR
SPSRSPVRKPSPVSGDSPPLPLMQSNTKTSQPPEEPDTSGTGLPETVIQEASSTGLIDTV
VESVKADSVAEVKEPSPEKPLKKEERPRSREREKDTRRERPHHRSRSRSHSRSRRRRSRS
RSYSPRRRPSPRRRMSPRRRSPPRRGPTGARQRHRRSPVHRRRSRSASSSGSSSSGSRSP
KKPVKRISTTPPRKQVHRPDTSVSPVGKDKRSPSPRARRGRGSPSPPRSSGVKRKPGGRG
NSPPDFAKARTSEGSESEEDKNEKGATADSVQQRRQYRRQNQQSSSDSGSSSSEDEGPKK
STTRPGARNGEVRRKRSRTPSPRRRHRDPSPRRRRSPSPGRRRRTPSPPRRRRSPSPPRR
RSPSPPPRRRSLSPRRYSPPIQRRYSPSPLPPQKRKMSSSPTKRFSPGPKRRPSRSPKRR
SSPTQRRRSPPSSTSPPRHRRSPPSARPGRDTRSPVGSARRLSPSPANRGRPVRRSTSPK
RRFDSSSTSPSNQRRQQSPPHSSKLIRRVSRTPEPRNKRISPSPKPIRRASSRSLSPQPA
AQKHPASASPPPSRSASGSPPPPPAKKASSGSGSQSPSKNSDVDGGGKKKKKKKEKKHKK
DKKHKKHKKHKKEKSSAVVTGDIQESRAAEDDGDSRKESESEVDDSLDDLEKHLREKALR
SMRKAQMSPSEMS
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggtacgagtgcggagcaagacaaccgcttcagcaacaag
cagaaaaaactgctgaagcagctgaaatttgcagaatgcctggacaagaaggtggacatg
accaaagtgaacctagaagtcatcaaaccatggattactcaacgtgtgactgagattctg
gggtttgaggatgatgtggtcattgagttcatattcaaccaacttgaagagaagcaccct
gatagcaagatgatgcagatcaacctgacggggttcctcaatgggaagaatgccagagaa
ttcatgaaagacttgtggcccctgcttttgagtgctcaggagaacattgctggcatccct
tctgcttttctggaacaaaagaaagaagaaatccgacagagacagattgaacaggagaag
cttgcttccttgaagaaggtagaccaggacaaaaaggacaaggacacaagagaaaggact
cgatcaaagagcccaagaagatggaagacaaggtcacctgggaagcgtgaaaggaaacgc
agtccatcgcgatccccagtgcgcaaacccagcccagttagtggggactctccccctctg
cctctgatgcagtcgaacactaaaacttcacagccgcccgaggagccagatacatcagga
acaggcctgccagagacagttattcaagaagcttcgtctacagggttaattgatacagtt
gtagagtcagttaaagcagactctgtagccgaagtcaaagaaccatcgccagaaaaacct
cttaagaaagaggaaagaccaagatctcgtgaaagggaaaaagacacgaggagggagaga
ccccaccaccgctctcgctcacgttctcactctcgttcccgcagacgacgctcccggtct
agatcctactctcctcgtagaagaccaagtcccagaaggagaatgtctccacgtcgaagg
agtccccctagacgtggccccactggcgccagacagagacacaggcggtctcctgttcac
aggaggcgctcccgttctgcttcatcatctggtagcagctcctcagggtcacgttcacct
aaaaaacctgtaaaaagaatatctaccacaccaccccgaaaacaagtccatcgtcctgac
acatctgtgagccccgttggaaaagacaaacgctcaccatctcctcgagccaggagaggc
aggggctctccttctccccccagatcatcaggagtgaagcgaaaacctggaggaaggggt
aattctccacctgattttgctaaggccagaacttctgaaggatctgagtcagaggaggat
aaaaatgaaaaaggggcaacagcagattcggtgcagcaacgacgtcagtatcgcaggcag
aatcaacagtcttcttcagattcaggatcttcctcctcagaagatgaaggaccaaagaag
tcaacaacaaggcctggtgctagaaatggcgaagtaaggaggaaacgcagccgtacaccc
tctcctcgtagacgacatagggatccctccccaaggaggcgacgttctccatctcctgga
cgtaggcgccgcactccttctcctccacggcgtcgtagatctccctcccctcctagacgc
aggtctccttctccacctccccgtcgtaggtctctgtcccccagacgctattctcctcct
atccagcgtcgctacagcccctcacctttgcctccacagaagaggaagatgtctagttca
cccacaaaacgcttttctccaggccccaagcgacggccctccaggtcacctaaacgtaga
agctctcccactcagcggagacggtctcctccctcctctacatctcccccgagacacagg
aggagcccaccttctgccaggccaggcagggatactcgatcccctgttggatctgccaga
cgcctctccccatcacctgcaaaccgcggtcgccctgttaggcgatccactagtcctaag
agacgctttgattcctccagcacgtctccctccaaccagcggcgacagcagtcccctcca
cacagcagtaagctcatccgtagggtgtctcgcaccccagagccacgtaacaaaagaatc
tctcccagtccaaagcctataaggagagcatcatccagatcactttcccctcagcctgca
gctcagaaacatccagcctctgcatctcctccaccttcccgatctgcgagtgggtcacca
ccaccacccccagccaaaaaggctagtagtggttctggcagtcagtcgccaagcaagaat
tcagatgttgatggtggtggcaagaagaagaagaagaagaaggaaaagaaacataagaaa
gataagaagcacaaaaagcacaagaagcataagaaggagaaaagcagcgccgttgtgacc
ggtgacattcaggagagccgggctgcagaagatgacggtgattccagaaaggaatctgag
agcgaagttgacgacagcttagatgatctggaaaagcacctcagagaaaaagcactgcgc
tcgatgaggaaggcccagatgtctccatcagagatgtcctga
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