Girardinichthys multiradiatus (darkedged splitfin): 124855579
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Entry
124855579 CDS
T08099
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124855579 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124855579 (sin3aa)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124855579 (sin3aa)
REST complex
124855579 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
124855579 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
124855579
NCBI-ProteinID:
XP_047201504
LinkDB
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Position
2:complement(13789237..13813607)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLEDQDTVFASQQRRLAGNPEPFQHRILAPAPAAPAVYEAVTDNMQPTAGIQYSIPQ
GYQVPTVAQNSSGHGHAPSPAVHTGPHHHSPVVQPHGPSVMSGHGHTAPSPSSAQGHQQF
QRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDL
IMGFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPITGAATQHPPQLPSAA
AITAPPLLTQPTPAKINKPPQPQAVTPSSQTNPSIPTYTSPRSPPVQLHPPLGGTPAGPP
MQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTE
QEVYAQVARLFKNQEDLLSEFGQFLPDANSSAMLNKTNAEKAESVKNDHGLTTKKLQLNN
KQRPNQNGCQIRRHPTPGATPPVKKKPKLLNLKDSPVADPNKHGVGTESLFFEKVRKALR
SAEAYDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFGWFKNFLGYREMSHIETYPK
ERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDS
TFVSSKKTQYEEHIYRCEDERFELDVVIETNLATIRVLETVQRKLSRMSAEEQAKFRLDN
TLGGFSEVIHRKAIQRIYGDKAPDILDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNK
IWREQNEKYYLKSLDHQGINFKQNDTKVFRSKSLLNEIETIYDERQEQASEENSSAPTGP
HLTLAYEDSQILEDAAALIIHHVKRQTSIQKEDKYKIKQIIHHFIPDMLFAQRGELSDLE
EEEEEEDVELEEDASKKHNGVSGSGSPSKSKLLFGNTAAQKLRSCDDAYNLFFVNNNWYI
FLRLHQTLCSRLLRLYEQAERQIEEDVRERDWEREVLGLKKEKNDNPAIQLRLKEPMDIE
VEDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSD
EICIQVTDLYLAESGNGATGGALSAQPSRSSAEAIYQRKAEQLMSDENCFKVMFSKKRGQ
VQLIVELLDTEEENSDEPMEAERWSDYVERYLNPDSTTPELREHLAQKPVFLPRNLRRIR
KNQKGKEQMDKEVCEGGKKSLEKEKMECMFKLNSYKMVYVFKSEDYMYRRTALMRAHQSH
ERVSTRLHKRFQAWVDSWVKEHVTRDMSAETTKWLMGEGRDGLLPCTTTRHPEVLQYMNI
NKYRVKYGTPSKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgtctggaggatcaggacacggtttttgcatcgcagcagcggaggcttgct
ggcaaccctgagcctttccagcatcgcatcctggcccctgcccctgctgctccggccgtg
tatgaagccgtgaccgacaacatgcagcccacagctggcatccagtactccatcccccag
ggataccaggtccccactgtggcccagaacagcagcggacacgggcatgctccgagtccg
gcggtccacaccgggccccaccatcacagccccgtcgttcagccccatgggccatcagtg
atgtcggggcatgggcacacggcgccctccccatcctctgcacagggtcatcagcagttc
cagaggctcaaggtggaagatgctttgtcgtacttggatcaagtgaaactacagtttggg
aaccagcctcaggtctacaatgactttttagatataatgaaagagttcaagtcccaaagc
atcgacactcccggggtcataagcagagtgtcgcagctcttcaaaggccaccctgacctc
atcatgggcttcaacacttttctgcccccgggttacaagatcgaggtccagaccaatgac
ctggtcaatgtgacgactccgggtcagattcaccatataacccctcatggcatttcggtc
cagaacatccccataacgggagcggccacccagcatccgccccagctcccgtctgctgct
gccatcacagctccaccgcttctgacgcagccaacccccgccaagattaacaagcctcct
cagccacaggcggtgacaccaagcagccagaccaatccgtccatccccacgtacacctct
ccccgctctccgccagtgcagctccacccacctctcggtgggacccccgctggtccaccc
atgcagaacaaccagcccgtggagttcaaccacgccatcaactacgtcaacaagatcaag
aaccgcttccagggccagccagacatctataaagcctttctagagattctccacacatac
cagaaggagcagcgtaatgctaaagaggctggagggaactatacgccggctctgacagag
caggaggtctacgctcaggttgccaggctcttcaagaaccaagaggatctgctctcggag
tttggacagtttctccctgatgccaacagttcagcaatgctaaataagaccaacgcagaa
aaggcagaatccgtaaagaacgaccacggcctcaccaccaaaaagctgcagctcaacaac
aaacagaggcccaatcagaatgggtgtcagatccggcgccacccgactccaggggccact
ccacccgtcaagaagaagcccaagttactgaatctaaaggattccccggtggcagatccc
aacaagcatggagtcggcacagagtctctgttctttgaaaaggttcgcaaagccctgcgg
agtgccgaggcttatgacaacttcctgcgctgtctggtcatctttaaccaggaggtgatc
tccagagctgaactggtgcagctggtgctgccctttttgggaaaatttcccgagttgttc
ggctggttcaaaaacttcctgggctatcgcgaaatgtcccatattgagacataccccaag
gaacgggccacggagggtatcgccatggagattgattatgcttcctgtaagcgactgggt
tctagttacagagctctgcccaaaagctaccagcagcccaagtgtaccggcagaactccg
ctttgtaaagaggtcctgaacgacacctgggtctcctttccctcgtggtccgaggactcc
acgttcgtcagctccaagaaaacccagtatgaggagcacatctataggtgtgaggacgaa
cgttttgagctggatgtggtgatcgagaccaacctggccaccatcagggtgctggagacg
gtgcagcggaagttgtcccgcatgtccgcggaggagcaggccaagtttcgcctggacaac
acgctgggtggtttctcggaggttatacaccgcaaggccatccagaggatatacggagac
aaagctccagatatccttgacggcctgaagaagaaccctgctgtttctgttcccatcgtg
ttgaaaaggttaaagacgaaggaggaggaatggcgggaagcccagcggggcttcaacaag
atctggagggaacagaatgagaaatattacctcaaatctctggaccatcaaggcatcaac
ttcaaacagaacgacaccaaagtgtttcgatccaagtctttgctaaatgaaattgaaacc
atatatgatgagcggcaggagcaggcgtcggaggagaattcctccgcacccacaggcccc
cacctgaccctagcgtacgaggatagccagatcctggaggacgcagcagcgctcatcatc
caccacgtgaagcggcagaccagcattcagaaggaggacaagtacaagatcaagcagatc
atccaccacttcatccccgacatgctgttcgcgcagcgcggcgagctgtcggacttggag
gaggaggaggaagaagaggacgtagagctggaggaggacgcttccaaaaagcacaacggc
gtctcgggtagcgggagcccctccaagtccaagctgctgtttggcaacacagcagcgcag
aagctgcgctcctgcgacgacgcctataacctcttctttgtcaacaacaactggtacatc
ttcctgcgcttgcaccaaacgctgtgctcgcgcttactgagactgtacgagcaagcggag
cggcagatcgaagaggacgtcagggagcgggactgggagcgagaggtcctggggctcaag
aaggagaagaacgataatcctgcgatccagctcagactcaaggagcctatggacatcgaa
gtggaggattactattcagctttcctggagatggttcggaatttgcttgatggaaacatg
gaagcttctcagtatgaggactctctgagggaaatgttcaccatccatgcttacatcgcc
ttcaccatggacaagctcatccagagcatagtccggcagctgcagcacatagtgagcgac
gagatctgcatccaggtgacagacctctaccttgcggagagtgggaacggggccaccggg
ggagccttgtctgcacagccttcaaggagctcggctgaggcgatctaccagcggaaagcc
gagcagctcatgtctgatgagaactgcttcaaggtgatgttttcaaaaaaaagagggcaa
gtgcagctcatagtggagttgctcgacacggaggaggagaactctgacgagcccatggaa
gccgagcgttggtccgattacgttgaacgctacctaaacccagactccaccactcccgag
ctgagggagcatctcgcccagaagcccgtgtttcttccaaggaacctgagacggatcagg
aagaaccagaaaggcaaggagcagatggacaaggaggtctgcgagggaggaaagaaatcc
ctggagaaggagaagatggagtgcatgttcaaactaaactcctacaaaatggtctacgtc
ttcaagtctgaggactacatgtatcgacgcacggccctgatgagggctcaccagtcccac
gagagggtgagcacgcgactgcacaagcgcttccaggcctgggtggattcctgggtcaaa
gagcatgtcacccgtgacatgagcgctgagaccaccaaatggctgatgggcgaaggacgc
gacggcctgctgccctgcaccaccacacgccacccggaggtccttcagtacatgaacatc
aacaagtaccgtgtaaaatacgggacgccgagcaaggcgccgtag
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