Girardinichthys multiradiatus (darkedged splitfin): 124855597
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Entry
124855597 CDS
T08099
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124855597 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124855597 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
PDZ domain-containing proteins
MAGUK family proteins
124855597 (pals1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
SH3_2
PDZ
PDZ_6
SH3_1
L27
PDZ_2
SH3_9
MMR_HSR1
PADR1_N
Motif
Other DBs
NCBI-GeneID:
124855597
NCBI-ProteinID:
XP_047201523
LinkDB
All DBs
Position
19:complement(640556..679702)
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AA seq
676 aa
AA seq
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MLGAQSVSRMTTSHLNGHVGGEGGGGRGGDEEARGGQQHREMAVDCPGELGSRTLPVRRS
AQLERIRQHQEDLRRRREEEGRQLDLNASLRLRKLSQNPHVGIDNPTFLQDSLIPQQPSL
SSQQSQALLELEELLLSLKQVRGCLSDQQSQNDIELVLALLNKADFQSALKIHNAVASSM
HQPSPPFPQTQQAQPLAMEVRNLMQSCQSKEGLELLSLLSDTHIQSLLLAHDSIAEGEME
PESQPVEGKTFTQWGGETVKIVRIEKAQDVPLGATVRNEMDSVVISRIVRGGAAEHSGLL
SEGDEILEINGIEIRGKDVNQVFDILADMHGLLTFVLIPSAQTKPPPPKETVIHVKAHFD
YDPSDDPYVPCRELGLSFQKGDILHVISQADPNWWQAYRDGDEDNQPLAGLVPGKTFQQQ
REAMKQTIEEDKESEKPGKLWCAKKRKRKKLLYSHRNDDLDDEILTYEEMALYHQPANRK
RPVALIGPNTCGQAELRQRLLNNQPERFAGAVPHTTRSRREGEVSGRDYHFVSRQAFEAE
LTSGKLIESGEFEKNLYGTSTDSVRQVINTGKICVLCLHTQALKVLRSSDLKPYIIFIAP
PSQERLRALLVKDNKNPKPEELREIIEKAREMEQSCGHLFDAIIVNTDLDKAYAELLRLI
NKLDTEPQWVPCSWLR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctcggtgcccaaagcgtatcaaggatgacaacctcccacctgaacggtcatgttggc
ggggagggaggaggaggacgaggaggagatgaagaggccaggggaggacagcagcaccgg
gaaatggctgtggactgtccaggggagctcgggagccgtacgctgccggtccgacggtct
gcacagctggagaggatacgacagcaccaggaggatctacggcggcgcagagaggaggag
ggccggcagctggacctgaacgcctcgctcagactcaggaagctctcccagaatccacac
gttgggatcgacaaccccacgttccttcaggactcactgataccgcagcagccatcgctc
agcagccagcagagtcaggcgctgctggagctggaggagctgctgttgtcgctgaagcag
gtccgaggctgcctgtctgaccagcagagccagaatgacatagagctggttctcgctctg
ctcaacaaggctgacttccagtcagcactgaagatccataatgctgtggcctccagcatg
catcaaccctctcctcctttcccacaaacacagcaggcgcagccactggccatggaggtc
aggaacctcatgcagtcctgtcagagtaaagaaggactggagctgctcagcctgctgtca
gacacacacatccagtcgttgcttctggcccatgacagcatagcagagggagaaatggag
cctgagtctcagccggttgaaggaaaaacttttactcagtggggaggagagaccgtgaag
attgttcgcatagaaaaagctcaagatgttccactgggagcaacagttcgtaatgagatg
gacagcgttgtcatcagtcgtattgttcggggaggagcagctgaacacagcggacttctg
tctgagggagatgaaatcctggagatcaacggcatcgagatcagaggaaaggacgtcaac
caagtgtttgacattcttgccgacatgcatggcctcctgacctttgtgttaattcccagc
gctcagaccaagccccctcctcctaaagagaccgtgattcatgtaaaggcccactttgac
tatgacccctctgatgacccgtatgtgccatgcagagagctgggcttatccttccagaaa
ggagatattctccacgttatcagccaagcagatcccaactggtggcaagcttacagagac
ggggatgaggataaccaaccgctagctgggctggttccagggaagaccttccagcagcaa
agagaagccatgaagcagaccatagaagaagacaaggagtctgagaaacctgggaagctt
tggtgcgccaagaagaggaaacggaagaagctgctgtactcccacaggaacgacgatctt
gatgatgaaattctgacttatgaggagatggctctttatcaccaaccggctaataggaag
cgtccggtcgctctgattggtccaaacacctgtgggcaggcggagctaaggcagagactc
ctcaacaaccaaccagaacgcttcgctggagctgtgcctcacaccacacggagccgtcga
gaaggtgaggtcagtggtcgagattaccactttgtgtcccgtcaggcctttgaagcagaa
ctaacatctgggaagctgatcgagtctggagagtttgagaagaacttgtacggtaccagc
acagactctgtaaggcaggtcatcaacactggaaaaatctgcgtgctctgtctgcacacg
caggccctgaaggtgctgaggagctcagacctgaagccttatatcatcttcatcgcaccg
ccctcgcaggagcgacttagagcgcttctggtgaaggacaacaagaacccaaagcccgag
gagttgcgtgaaatcatcgagaaggcccgggagatggagcagagctgcggccacctgttc
gacgccatcatcgtcaacacggacctggacaaggcgtacgccgagctactgcgactcatc
aacaagctggacaccgagccgcagtgggtgccgtgctcctggctgcgctga
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