Girardinichthys multiradiatus (darkedged splitfin): 124855810
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Entry
124855810 CDS
T08099
Symbol
nrde2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124855810 (nrde2)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124855810 (nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
124855810
NCBI-ProteinID:
XP_047201865
LinkDB
All DBs
Position
19:22485639..22498523
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AA seq
1204 aa
AA seq
DB search
MCDTIMALFPAFAEVSKNQVEDSSRELDWLNNKSFQTGDALSLHSRFLEKSIEKPNKREE
SVGKDVTSSNEEERGNGDGPPKKKKNKSEKKRKKKKKHKKKSGRHSSTSGSDSETIYPSD
LKREEDGLRQKSASLGTCFSWLDDLQSPTEHPFCVDCKPDPANWTYKSLYRGDVARYRRK
GSSTLGLDLHRQGVSWEEYETKKKKKKAGVSGNAADRYFSVATRKLLRAEPPVSVLPAMA
KGCDVSNTTSFLPLGNVERDNTGHELGDKAPTSVNPLGVYDSSTALWLQGKGQQDNLNQN
TETEEKFRYVAGKTEEFNRRLREQPADTQLWIKFIHYQDELSAAAFGGDEEQQGSDLAEH
RKSSYRAVLEKKLSIADRAVETNPTCIALQLERLQICQELWEPSTLAKEWKKLVFLHPNS
APLWKQYLLFTQSYFSSFTVTKVNSAYGKCLSTLSAVRDGSMVSHPALPGIEEDMLDIFT
QQCHFLRQSGHSEKAISLFQAMIDFTYFKPDSVKNLSTKQQADFFETFWDSGEARVGEVG
ARGWKAWMTQQERGGWVQPPAEEEEEEEDEDEEEVKDRTQPRGTVWLDVESSREASHWLP
WRPDKAKGQSEEDCEDPDRQVLFDDIGPSLICLSSAELQLRFLLSVLSFLGFPVDFLLSA
APYQPSLLLENLSLLTQGTELHRPLTSFNLPVLETGINSVGHMTSLQGTRKWSGLGKQGE
KFLTNVFSMLQPVLAAPHRAVLSLSWILYEKLKVLHILRSSNKKCLRSQGKSSKRVAKRL
LKEPENRSSLVLWREYAHLEWMLSNLDEARKVFSTATAMGGTKGLSSPALCELCLLWSQL
EVENTAKELGGVTDVTTSPAVVVLTRLAEGTSSSSSSQTLSPVSILKARRSYEQSLSSSL
SSLEKHIWNPQLDKKADQDDPEEEKLRLRGLVGCYALFQYLTVSIQAANTVYSEARERME
ELYRSLTPERQLNRDEATSLPSRTVHRHHVSWLASDCQAIAVQQAALLRYNNNVGVCPLP
TLRQMLTSALSAWPTSAPLWSVYIQVENRYHSAGRARRFFHTVTRDNSSLVPRLFAIVAE
QHRRQLVDAAQRSCRLDDALPILPENGLSNRIRALFEGAASTEMGAHCPLLWRMYIHFLV
SEGKVDKARGIFYKALQNIPWAKGLYMDAVQLFPEHLQEFVDLMTEKELRLRLPLEELDI
LLED
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgacaccatcatggctctttttccagcttttgccgaagtttcgaaaaaccaagtt
gaagattcgtctagagaattagactggctaaacaataagagttttcagactggagatgct
ctttcccttcacagtcgttttttagagaagtccatcgaaaagccgaacaagagagaggaa
agtgttggaaaggatgttacatcctctaatgaggaagagaggggaaacggtgatgggcct
ccaaagaagaagaaaaataaaagcgaaaaaaagaggaaaaaaaagaaaaagcataaaaag
aagagtggaaggcattcaagcaccagtggatcggactctgaaaccatctatcccagtgat
ctcaaaagggaggaggatgggttaaggcaaaagtctgcttcattaggaacttgtttttcc
tggttggatgacctccagtcaccaactgagcatccgttctgtgtggactgtaaaccggac
ccggccaactggacttataagtccctgtacagaggagatgtagctagatataggagaaaa
ggaagctccactttgggtctggaccttcacaggcagggagtcagctgggaggaatatgag
acaaaaaagaagaagaagaaagccggagtcagtggaaacgcagctgacagatatttttcc
gtagccactcgaaagctgctgcgggctgaacctcctgtttctgttttacctgctatggca
aaaggttgtgatgtatccaacacaacttccttcctccctctgggtaatgttgaacgggac
aacacgggacacgagttaggtgacaaagcaccaacgtcagtaaatccccttggcgtgtat
gattcgtccactgccctctggctgcagggtaagggacagcaggacaacctgaaccagaac
acagagacagaagaaaagtttcggtatgtggctggaaagaccgaagagtttaaccggcga
ctcagggagcagccagcagatacacagctgtggataaagttcattcactaccaggatgag
ctgagtgcagctgcatttggaggtgatgaagagcagcaaggtagtgacttagcggagcac
cgtaagtcctcttacagggcagtgctggagaaaaagctgagcattgcagacagagctgtg
gaaaccaaccccacctgcatcgcactgcagctcgagaggctccagatctgccaggagctc
tgggaaccctccactttagctaaagaatggaagaaactggttttcctccacccaaacagc
gcccccttgtggaagcaatatctgctttttacgcagagctacttcagcagcttcacagtg
acaaaagtcaactctgcatacggaaagtgtctgagcacactcagtgctgtaagagatggc
agcatggtgtcccacccagctttgcctggaattgaggaagatatgctggatatcttcacc
cagcagtgtcatttcctgcgtcagtctggtcactctgagaaggcgatttctctgtttcag
gccatgatcgattttacttacttcaaacctgacagtgtgaaaaacctttccacaaagcag
caggctgatttctttgagacattctgggacagcggagaggcgagagttggggaggtaggg
gccaggggctggaaggcctggatgacccaacaagagcgaggaggatgggttcaaccccct
gcagaggaagaagaagaggaggaggatgaggatgaagaggaggtaaaggataggacccag
cccagaggaaccgtctggttggatgtggagtcgtcccgtgaagcatctcactggctgccc
tggagacctgacaaagcaaaaggccagtcagaagaggactgtgaggaccccgacagacag
gtgctgtttgatgacatcggtccatcccttatttgtctgtcttcagcagaactccagctt
cggttccttctcagtgtcctgtcctttctgggttttcctgtagactttttgctctctgct
gccccctatcagcctagcttgctcctggagaacctctctctgctcactcaaggtactgag
ctccatcgtcctctgacttccttcaacctccctgttttagagacagggattaactctgta
ggtcacatgaccagtctccaaggaacaaggaagtggtcggggcttggaaagcagggcgag
aaatttctcaccaacgtgttcagtatgcttcagcctgtccttgctgcccctcatcgagcc
gttctgtcactcagctggatattgtatgagaagctcaaggttttgcacattctgcgcagc
agcaacaaaaagtgccttcgctcccagggaaagagcagcaagcgagttgccaaaagactt
ctgaaagaacctgaaaatcgctcttcactggtgctgtggcgggagtacgcacacctcgag
tggatgctgtcgaacctggacgaggctcggaaagtgttctctacagcgacagcaatggga
ggaaccaaggggctgagtagtcctgctctgtgtgagttgtgcctcctgtggtcccagcta
gaggtggagaatacagcaaaggagctgggaggagttactgatgtaacaacatcaccagct
gttgtggtgctgaccaggctggcagaaggaacgtcttcatcttcatcctcacagaccctt
tccccagtgtccatcctgaaagccagacgatcctatgagcagtctctgagctctagcctg
tcatctctggagaaacacatctggaatcctcagctggacaaaaaagcggaccaagatgac
cccgaggaagagaagctgaggttaagaggcctggttggctgctatgctctgtttcagtat
ctaacagtgagcatccaagctgctaatactgtctacagtgaggccagagagaggatggag
gaactgtaccgctcattaacacctgaaaggcagctcaaccgcgatgaagcgaccagcctg
ccgagtcgtactgtgcacaggcatcacgtcagctggttggcctcagactgtcaggcaata
gcagtgcaacaggcggcactgctgagatacaacaataatgtcggtgtgtgtcctttgcca
acactgagacagatgcttacctctgccctctcagcctggcccaccagtgcccccctgtgg
agtgtatacattcaggtggaaaaccgttaccatagcgctggccgggcacgccgttttttc
cacactgtaaccagagataacagcagcctggtaccccgtctgtttgctattgttgctgaa
cagcacagaaggcagctggtggatgcagctcagaggtcttgtcgcttggatgatgccctg
cccatactgccagaaaatggcctcagcaaccgaatccgagcactgttcgagggcgctgca
tcaacagaaatgggtgctcattgccctttactgtggaggatgtacatccatttcctggtg
tcagaggggaaggtagataaagccagggggatcttttacaaggccttgcagaacattccc
tgggcaaagggtttgtatatggatgcggtgcagttgttcccagagcacctgcaggagttt
gtggatctgatgacggagaaggaacttcgactaagactgcctctagaagagctggatatc
ctgctagaagactaa
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