Girardinichthys multiradiatus (darkedged splitfin): 124855985
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Entry
124855985 CDS
T08099
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04520
Adherens junction
gmu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124855985
04530 Tight junction
124855985
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Gene cluster
GFIT
Motif
Pfam:
DIL
RA
PDZ
PDZ_6
PDZ_2
RA_2
RA_3
RASSF8-10_RA
ASPP2-like_RA
Motif
Other DBs
NCBI-GeneID:
124855985
NCBI-ProteinID:
XP_047202114
LinkDB
All DBs
Position
19:30052794..30071138
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AA seq
1227 aa
AA seq
DB search
MPETKEREKLAEVIRQWNSNRLDLFEISQPDENLVFHGVIRFYFEDHTEGSVATKCLRVC
SSSSTREVIETLSEKFRPDIEKQSTDYSLYEIHKYKERKLDLDERPLVIQLNWTSNNREG
QFVLRKKQESLKESCHEKEKGGVLQSFKKTLSRKGKKKERGPAKDDDKASEDRSAEDLLN
NNICLSSLESLKYCKEIKTNQMLEGFSDQSGLPVRITFCNDAEEPFLSAVINYTNSSTVH
FKLSPAYILYAVSRSALQRQHRRGSPSSANTHAVTSITTKMAAMMGKVIQRQQAITGALA
FWMANSSELLNFLKHDKDLTQVTQQSQLGLSHQVHNAYSFLLHCLQSELRKHLPTFLIDP
KQHGALPAGIEMVLDTLMNVMSLLRRCRVNPALTIQLFSQLFHFISARLFNQLMVPETNP
PGLRSHYWGSALRQRLTPIEAWAERQGLELAADCHLGHIVQATTLLTMKKYSLQDAKDIQ
SSCFKLNSLQLRMLMAGYFYGTSEPQIPPDLMDAVVKAAEASADNLIHSEGCELRLEESL
DLLLPFLLPEGGYSCDTVRGIPQGLREFLEPICQKGLCCLTSVPHSQGAWTAYFSESTHN
DGDLYLAVHRQPEIENITLHKPLNSGMGVSIVAAKGAGQSNLGIYIKSVVKGGPAEMNGS
LAAGDQLLSVDGHSLVGLSQDRAAAIMMKTGPVVTLKVEKFAASYHGLLELLNEPPPENK
TSKNYLSGGENAKLNNAVSTLYCVVDLSPSERLHGGSETKKDQRIQKNRQLFCSNPNMTA
GFCLEDGGELVDPDVRGNNLLSISSVNLCADRLHREYLTLPNPKSLKRSVFELGRPTQPF
IMAVTPSNEPSSSRRVFVRQAMSQENLCMDTRGPLLDQRQNTCAHRNQNSKQSSSYCLSF
PIRSSVSTHDILSDHSGPTKPLRGSCPSPAGVWRTPFSQQSTPIPSAQPIRIDIPITRAG
STQSNPPLTTFQQSSSVDHKVSEQKKNAPSQVSHISACPLSPKKLFQPSILWQQRSTVCG
DRVEKPQVSITPTKHVSFQVTLSKQTRSCLTNQKRTQVLCNPWRREAQEMLEKQQRLQAV
ELLEQEVQQLQATDKRSAEENDRLRRLDLEWRFQKRLQEIQQRGDEEEEEEDLDMMVILQ
QLGDRTSKDKDKISYVGNANREQNEEEKQAGNRLSNKQKEAKNDQIENGLNNIASDENLV
ENIKRVSAPEKLTFRERQHLFSLTSSA
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgccagagacgaaggaacgagagaaactagccgaagtcatcagacagtggaacagcaac
agactggacttgtttgaaatcagccaacctgatgagaacctggtgtttcatggcgtgatt
cgcttctactttgaggatcacacagagggaagtgtggccacaaagtgcctgcgagtttgt
agcagctcgtcaactcgggaggtcattgaaactctttcagagaagttcaggcctgatata
gaaaagcagtcaacagattattcattatatgagatccacaaatataaagaacgaaagctg
gatctggatgagagacctctggtcatacaattgaactggacctcaaacaaccgagaagga
caatttgttctcagaaaaaaacaggagagtttgaaggaaagttgtcacgaaaaagaaaaa
ggaggggtccttcaaagctttaagaagacgttgtcaagaaaagggaaaaagaaagagaga
ggcccagccaaagatgatgacaaggcatcagaggatagatcagctgaagatctactgaac
aacaacatctgtttgtccagccttgagtctctaaaatattgcaaagaaataaaaacaaat
cagatgctagaaggtttttcagatcagtctggattaccagttagaattacgttctgtaat
gatgccgaggagcccttcctctctgcagtcataaattacaccaacagctccacagttcat
ttcaagctgtcacctgcatacatcctctatgctgtgagccggtctgccctgcagcgccag
caccgcagaggctctccatcttctgcaaatacacacgctgtaacgtcaatcacaaccaaa
atggccgccatgatgggaaaggtcatccagaggcagcaggccatcactggggctcttgcc
ttctggatggccaattcctctgagctgctgaactttctgaagcatgacaaagacctcacc
caggtcacgcagcagagtcagctgggtctgtcccatcaggtgcacaacgcctacagcttc
ctgctacattgcctacagagtgagttgagaaaacatttaccaaccttcctcattgatcct
aagcaacacggtgctctcccagctggtatagagatggtgttggacaccttgatgaacgtc
atgtctcttctacgccggtgtcgggttaacccggcccttacgatccagctcttctcccag
ctcttccacttcatcagtgccaggctttttaatcagctcatggtgccagaaaccaatcct
ccagggctgcgctctcactactgggggtctgcactgcgtcagaggctaactcccatcgag
gcctgggcagagaggcagggcttggagctggctgctgactgccacctgggacacatagta
caggcgaccacactcctgacaatgaagaagtactcactgcaggacgcaaaggacatccag
agttcctgtttcaagttgaactccctgcaactgcggatgttgatggctgggtacttctat
ggaaccagtgagcctcagattccccctgacttgatggatgccgtagtgaaggctgccgag
gcctctgctgataacctgattcacagtgaaggatgtgagctccggctggaggagagcctt
gatctgctcctgccattcctgctgccagagggaggatactcctgtgacacagtgagagga
atccctcaggggttgagagagtttttggagccaatttgtcagaaaggtctctgctgtttg
acctctgtgcctcattcccaaggagcctggacggcgtactttagtgaaagtacacataat
gatggggatttatacttggcagtacacagacagcctgagattgagaacatcactttgcac
aaaccgctgaacagtgggatgggagtcagcattgtagcagccaagggagcaggccagagt
aacctcgggatctatattaaatctgttgtcaagggaggaccagctgaaatgaacgggagc
ttagcagctggagatcagcttctcagtgtggacggtcacagtctggttggactcagccag
gacagggcagcagcgatcatgatgaaaaccggccctgtggtgaccttaaaggttgaaaag
tttgcagcgagctaccatggtctcttggaactacttaatgaaccacccccagaaaacaaa
acaagcaagaactatttaagtggtggagaaaatgccaagctgaacaacgcagtgtccacg
ctgtactgcgttgtggatctcagcccctcagagaggctccatggaggcagcgaaactaag
aaagaccagaggatacagaaaaaccgacaacttttctgctctaaccccaacatgaccgct
ggcttttgcctggaggatggaggtgaactcgttgaccccgacgtgagaggaaacaacctt
ttgtccatttccagcgttaacctttgcgctgatagacttcacagagaatacctgacgcta
ccgaaccctaaatctctgaaaaggtctgttttcgagctgggccgaccaacacaaccattc
ataatggctgtgactccttcaaatgagccgagctccagtagaagagtcttcgtgcgccaa
gccatgtctcaggagaacttgtgcatggacaccagaggccctctgctggaccaaaggcag
aacacatgtgcacacaggaaccagaattctaaacaatcgtcaagctactgcttatctttc
cctattcgctccagtgtttctacacatgacatcctctctgatcacagcggccccacaaaa
ccactgcgaggaagctgtccgagtcctgccggtgtatggaggacccctttttcacagcag
tccacacctataccttcagcgcagcctatacgcatcgacatccccatcaccagagcaggg
agcacacagtcaaatcctccactcaccaccttccagcagagctcctctgtggatcataaa
gtcagtgaacagaaaaagaatgctccaagccaagttagtcatatatctgcatgcccatta
tcgcctaagaagctgtttcagccctcaattctttggcagcaaagatcaactgtatgtgga
gatagagtagaaaaacctcaagtgagcatcactccaacaaaacacgtttccttccaagtg
actctgtcgaagcagacgagatcatgtctgacaaaccaaaaaagaacccaagtgctgtgt
aatccctggaggagggaagcccaggagatgctggagaagcagcagaggctccaggccgtg
gagctcctagagcaggaggtgcagcagcttcaagccacggacaaacgaagcgcagaggag
aatgatagactgcggaggcttgacctggagtggcggtttcagaagaggctgcaggagatt
cagcagagaggagatgaagaagaggaggaggaagatctggacatgatggtgatcctgcag
cagttgggggacagaacatctaaagacaaggacaaaatcagctatgttggaaatgccaac
agggaacaaaacgaggaggaaaaacaggcaggcaatcgactttccaacaagcaaaaagaa
gcaaaaaatgatcaaatagaaaatggactgaacaacatagcatcagatgagaatttggtg
gagaacatcaagagggtgtcagctcctgaaaagctcacattcagggagcgtcagcatctt
ttttccctgacatcaagtgcataa
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integrated database retrieval system
