Girardinichthys multiradiatus (darkedged splitfin): 124856089
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Entry
124856089 CDS
T08099
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmu00535
]
124856089 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124856089 (acanb)
04091 Lectins [BR:
gmu04091
]
124856089 (acanb)
Proteoglycans [BR:
gmu00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
124856089 (acanb)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
124856089 (acanb)
Lectins [BR:
gmu04091
]
C-Type lectins
Lecticans
124856089 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
UL45
Motif
Other DBs
NCBI-GeneID:
124856089
NCBI-ProteinID:
XP_047202242
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All DBs
Position
2:611943..636034
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AA seq
1265 aa
AA seq
DB search
MVKMTTLLLLCMSLPIILATTTLKDPNDRDGSLKVSIPVESPLRPLLGGKVEVPCYFQEN
IVNDPGAPTIAPLSHRIKWTYVTKDNVSSILVASEGKVYVEAEYLDRVTLVNYPMVPTDA
TMVITELRSKDSGTYRCEVIHYIEDSYDSVDIQVQGVVFHYRAISTRYTLTFEKAKAACI
QNSASIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPREPCFGDKENFPGVRTYGIR
DVNETYDVYCFAEKMSGRVYYSMSVDKFSFYEAKDQCVKLGARLATTGELYLAWKDGMDV
CNTGWLADRSVRYPINIPRPQCGGGLVGVRTVYLFPNQTGYPYPDSRHDAVCFQENDDED
AVPGRTTPFPDIQFRSTSEHYPTLTASPGSKEIKSGGIVTLSPLLFPPAVDESGEDVAMG
PTGVVFHYRPITGRYTLTFLEAQQACRNIGAVIASPQQLHAAFERGLHQCDAGWLRDQTV
RYPIVSPRNNCAGNLLNLPGVRSYGLRPVNERYDVFCYVDRLKGEVFFTTDYDSFSYDEA
VQHCQKLNTTLATPGQLYAAWKQGLDKCRPGWLMDRSVRYPITTPKSYCGGGQVGVHTIY
AFPNQTGFPDEHSRYDAYCFRAHFPVLFNNFTPESVTENKDVVQKITVGPLHITPTDPTP
VSYNETVMNTTDAEFINETIITPAHGPPTVNTIFPPVPVDTSGSGSAEHSASGESSGESS
TSTTSGDTSGSGQEVTFSGHSGVLSGEQSASGSPQEGKEGSAFITSRDLGSASGAESGSG
ILISGSGFSSGSGDISGSGDDKWVTLVDEKLVYLSKTSKNDTRQELGRGRIETSGESSVS
GSGDMSASSSGGFSGILFVNHSGIDLTPQQSGEQEVSGYQLSGYGYQSGFPSGFPSGFPS
GFSSGVPSGFPSGDSGSGSSSGDPFPKYDDIIHITKHEMIEVITDITEEGRGVVEMSGQG
SGSGIHHEFSGTSTQISGSGAAATKAYTEYVPTLDQSTPGATVEESDTGMTVYSVTPDAV
FTRPTTAPSVSLVTPAVVELPEVDEAMGSCPKGWIEFAGSCYLHHDERLTWSEAEKRCQE
LSAHLVSIGSPEEQRFVNSNGEHYQWIGLNDKDVQNKFHWTDGNPLSFENWRPNQPDNYF
GSGEDCVVMIWHEGGEWNDVPCNYHLPFTCKTTPVMCGAPPKVKNGSPIGGSRERHSVDS
MIRYQCDPGFMQRHLSVIHCMANGEWEEPQVQCIEAGANSNRLHKRSLRKRSKGVSSQQE
PRELL
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatgacaaccctgcttctgctgtgtatgtctttgcctattatcttggccaca
acaactttgaaagaccctaacgatagagatggctcactgaaggtcagcatccctgttgag
tcgcctctccgtcctctgctgggaggcaaggtagaggtaccgtgctacttccaagaaaac
attgtgaatgaccccggagcacccaccattgccccgctatcccaccgaatcaaatggacc
tatgtcaccaaagacaacgtttcctcaatcctggtagcatcagaggggaaggtttatgta
gaggcagagtatctggacagggtgacattggtcaactacccaatggttcccactgatgct
accatggtaataacagagctgaggtcgaaagactccggcacctatcggtgcgaagtgatc
cattacattgaggacagctatgactctgtagacatccaggttcagggtgttgtatttcac
tatcgggccatctccacccgctacaccctaacatttgaaaaagccaaagcagcctgtatc
cagaacagtgccagcattgctactcctgcacaactccaagctgcttacgatgacggatac
caccagtgtgatgctggatggctttcagatcaaactgtgaggtaccccattcatgagcct
cgggaaccttgctttggagataaggaaaactttcctggagtgagaacctatggtattaga
gacgtaaacgaaacatatgacgtgtactgcttcgctgagaagatgtcaggcagagtctac
tactccatgtctgttgacaagtttagcttctatgaagcaaaagaccagtgtgtcaaactg
ggtgcgaggctggccaccactggagagctataccttgcctggaaggatggcatggatgtg
tgtaacactggttggctggcagacaggagtgtacgctacccaatcaacatcccaaggcct
caatgtggaggggggcttgtaggagtaagaacggtctacttgttccccaaccaaactgga
tacccctacccagactctcgccatgatgcagtctgcttccaagagaatgatgatgaagat
gctgtacctgggaggaccacacccttcccagacatccaatttagatctacctctgagcac
tacccaaccctaacggcttcgcctgggagtaaagagatcaagtctggaggaatagtaact
ctctccccattgctgtttccacctgcagtggatgagtcaggtgaagatgtggccatgggt
cccacaggtgtggtgttccactacagaccaatcactggtcgttatactctgacctttttg
gaggctcagcaggcttgccggaatatcggagcagtcattgccagcccacagcagctgcac
gcagcctttgagagaggcctgcaccaatgcgatgctggctggctgcgcgaccaaactgtg
cggtatccgattgtgtcgcccagaaataactgtgctggtaacctgctaaaccttccagga
gtgagatcatatggcctgagaccagtcaatgaacgctacgatgtcttttgttatgtggac
cgtttaaaaggtgaggtcttcttcaccactgactatgacagcttctcctatgatgaggct
gtgcagcactgccagaaactcaacactaccctggccacccctgggcagctctacgccgcc
tggaaacagggactcgacaaatgccgcccaggctggcttatggatcgcagtgtccgctac
cccattacaacccccaaatcttattgtggaggcgggcaggtcggagtgcacaccatctac
gccttccccaaccagacgggatttcctgatgagcactcgcgctacgatgcctactgtttt
agagctcactttcctgttcttttcaacaatttcacccctgagtccgtgacagagaataaa
gatgttgtccagaagataaccgtcggaccgcttcacattacacccactgatccaactcct
gttagctacaatgaaactgtcatgaacacaaccgacgctgagtttatcaatgaaacaatt
attacacctgcacatggtcctcctacagtgaataccatttttcctccagtcccagttgac
acttcgggttctggttcagctgaacattcagccagtggggagtcctccggggaatcttcg
acctccaccactagtggtgacacatccgggtcaggacaggaagttaccttcagcggacac
agtggtgtgctttccggcgagcagtctgcttctggaagcccacaggaaggaaaggaaggc
agtgctttcattacctctcgagatttaggtagcgcatctggagctgaatctggatccggc
atccttatatcaggatcaggtttcagcagtggaagtggggacatcagtggtagtggtgat
gacaagtgggtcaccttggtggatgaaaaactggtgtatttgtcaaaaacttcaaaaaat
gacacaaggcaggagcttggtcggggaagaatcgaaaccagtggggaatcaagtgtttct
ggatcaggagatatgtctgcttccagctctggtgggttttctggcattctgtttgtcaac
cacagtggcattgacctgacaccccagcaatctggggagcaagaagtgtctggatatcag
ctgtctggctatgggtaccaaagtggctttcccagtggctttcccagcggttttcctagt
ggtttttccagtggtgttcccagtggctttccatctggtgattcaggcagcggctcttcc
tctggagacccttttccaaagtatgacgatatcatccacataactaagcatgaaatgatt
gaagtaatcactgacattactgaagaggggcggggtgtggtggagatgagtgggcaaggt
agtgggtcagggatccaccatgaattcagcggcacttcaacacaaatatcaggaagcgga
gcggctgctacgaaggcttatacagagtatgttcccactcttgaccaatcaactcccgga
gctaccgttgaggagagtgacaccggaatgacagtttattcagtcaccccagatgcagtc
ttcaccaggccaaccacagctccatcagtgtcattagtaaccccggctgttgtggagctt
cctgaagtggatgaagctatggggagctgtcctaaaggctggattgagtttgccggcagt
tgttacctccaccatgacgagagactcacttggtctgaggcagagaagcgctgtcaggag
cttagcgcccacctggtcagcattggctcgccggaagagcagcggtttgtcaactccaac
ggtgagcactatcagtggattggacttaatgacaaagatgtgcagaataagttccactgg
acagatgggaatccactgtctttcgagaactggagacccaaccagccggacaactacttc
ggttctggtgaggattgtgtggtgatgatctggcatgaaggtggcgagtggaatgatgtg
ccctgcaactaccaccttcctttcacctgcaagacaacacctgtcatgtgcggagcaccg
cccaaggtgaaaaacggcagtccaataggcggcagcagagagcgccattctgtcgattcc
atgatccgctaccagtgtgacccaggctttatgcagcgccacctgtctgtcatacactgt
atggcaaacggagagtgggaggagccacaagtccagtgcatagaagctggagccaacagc
aacaggctacacaaaaggtccctgaggaaaagaagtaaaggtgtcagcagccaacaggaa
ccgagggaactgctctga
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