Girardinichthys multiradiatus (darkedged splitfin): 124856201
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Entry
124856201 CDS
T08099
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like isoform X1
KO
K11757
protein polybromo-1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124856201 (pbrm1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124856201 (pbrm1l)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124856201 (pbrm1l)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124856201 (pbrm1l)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
124856201 (pbrm1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124856201
NCBI-ProteinID:
XP_047202429
LinkDB
All DBs
Position
20:complement(21743513..21762881)
Genome browser
AA seq
1643 aa
AA seq
DB search
MSANSKRRRATSPCSSVSGGGDPEDASSSTPGSGRKRRKLSNVLPVDTIAVCHELFNAVK
DYKDDTGRQLCDLFHRVPKRRNQPDYYEVVSQPIDMTKIQYKLKSEEYSDVEHLTADFQL
MFNNARNFYKRDSEEYQAACKLWEVYLQTRNEFVQPGDGDEEDEEGDDIMANPGMSNEYE
TSASSLKEVLEQLLQAIVSHTDPSGHLVSELFQKLPSKVQYPDYYAIIKEPIDLRTIAQR
IQQIGYYKTVNAMAKDIDLMTKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKS
SIRIRNRKSGQADRFSGVSVALQYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPI
FQLYEAVRGARNNQGQVFSEPFQQLPSRREYPDYYQQIKQPISLQQIRTKMKNGEYESVE
QIDADLNLMFENAKRYNMPNSSIYKRAFRLQQIMQAKKRELLRKDEEDGDSILSSDAGSV
KRKSHKKNVKKNRMKALYTAVGEAREAATNRRLCELFMVKPSKKDYPDYYNVILEPMDLK
TIEHKIKNERYTTEEELIEDMKLMFRNARHYNEEGSQVYNDADVLEKILKDKRKELGLPP
EEEDVGSPKLKLRKSGVSPKKSKYLTPLQQKLNELYDAVRNFTDRRGRRLSTIFLRLPSR
SELPDYYATIKRPIDMERIRSHMVTGRYQDVEALFEDFALMFNNACIYNEPESLIYRDAL
VLHRVLLETRKQQERGEDSGPPAVGPLVRELIRNLFVSVMGHQDEEGRCYSDSLAEIPAV
DPSAPEKPTLNFDIIRINVERGLYRRLDIFQEHMFEVLEKARRLNRTDSEVFEDAVELQQ
FFIKIRDELCKNGEILLSTALNYTLKHLHNDVEQDKREKIPKEIEEDKQKMEEEEGNKDE
KKAGDLEKEAWQSDSESQLVYSQNCSFENRTYHVGEFVYVEPSEPNLKPHIVCIERLWED
EIGGKWLYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKVLGKCMVIFVKDYFKM
LPEGFKLEDVYVCESRYAARNKSFKKIKVWAKPESSVKLVPRDVPLPVVRVASMFAKPDL
EKMAMSYAGIGNFIEKEREDVPMEMSATEPGCQCYEQLRFNKMWFKVGDCVYIQSHGLSK
PRVARIEKLWVQNGTVFLFGPIFIHPEETEHEPTKMFYKREVFLSHREETLPMSRVIGKC
TVSSFKDYLSNRPTEYTEEDILLCESRYIATEKIMKKFKGLKRFSYSSKVVEDEVYYFRK
LIVPQKEASPFLDKKIDELEVKLADIEDADDDIDDMDEDEDAPTTPSMPQMQSSLTSDMD
IMAYTPSQATPRVKGLAKKEGAKRKINMSGYILFSSEVRAIIKARHPDYSFGELSRLVGT
EWRNLEASKKAEYEERAARIVEQQERDRPFKQGSPKAGTPVGALMGVVPSPSTMGMINQS
MTPVSGMMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGGPNLPLHHLHQGMPGYPGMPHQG
MMGAGANGMAGSPGQSNFIQQPGMFSPGQNAPPPYPGPGQPSHLQPTTPMFVAPPPKTQR
VLHSEAYLKYIEGLNSESNTVSKWDQMLKAQRRDAHLTKEQESRLPAHWLKSKGAHTTMV
DALWRLRDLMLRDSLNICQAYNL
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactccaagaggagaagagccacctctccctgcagcagtgtcagcggaggg
ggagatcctgaggatgcctcttcctcgactcctggaagcggcaggaaaagaaggaagctc
tccaatgttcttcctgttgatacgattgctgtctgccatgaactgtttaatgctgttaaa
gactacaaggatgatacagggaggcaactttgtgacttattccatagggtaccaaagagg
aggaatcagcctgattattatgaagttgtatcccagccaattgatatgacaaaaatccag
tacaaactgaagtcggaagaatacagtgatgtggagcacctcactgctgattttcagctc
atgtttaataatgccagaaatttctacaagagagacagtgaggagtatcaagcagcctgc
aaactgtgggaagtgtatttgcaaacaaggaatgaatttgtgcagcctggagacggagac
gaggaggatgaagaaggtgacgacattatggctaatccaggaatgtcaaatgaatatgag
acatcagctagcagtctgaaagaagtgctggagcaacttttacaggctatagtttcgcac
accgacccctcaggccaccttgtcagtgaactgttccaaaaactgccttccaaagtgcaa
tacccagactactatgctattataaaagagccaatcgatctcagaacgattgctcagaga
atacagcagattggatactataaaacggttaatgctatggccaaggacattgacctgatg
accaaaaatgccaaaacatacaatgaaccaggatctcaggttttcaaggatgcaaacacc
ataaaaaaagtcttcatccaacgcaagactgaactcgaacatgctgagcctactaaatct
agtattcgcattagaaaccgcaaatcaggacaagcagatcgtttttctggtgtcagcgtt
gcccttcagtatggttcagagagtgaggacgaccctgtgctttcaggctctgtgtgctat
gatgagggagagtcagaggcagagagccagagttcgagcatggagatgagtaaccccatc
tttcagctgtatgaagccgttagaggggccaggaacaaccagggccaggtcttctccgaa
cctttccagcaactgccgtcccgcagggagtatcctgattactatcaacagataaaacag
cccatctcgctgcagcagataaggacaaagatgaagaatggtgaatacgaaagcgtggaa
caaatagatgccgacctcaatttgatgtttgagaatgcaaagcgctacaacatgcccaac
tcaagcatatacaaacgggccttcaggctacagcagattatgcaggcgaaaaagagggag
cttctgaggaaagatgaggaagatggagacagcattttgtcatctgatgcaggaagtgtt
aagaggaaaagccacaagaagaatgtcaaaaagaaccgaatgaaagcattgtacacagca
gttggtgaagccagggaggcagctaccaacagacgtctgtgtgaacttttcatggtcaaa
ccatccaaaaaggactaccctgactactataacgtcattctcgaaccgatggacctgaaa
accatcgagcacaagattaaaaatgaacgctacaccaccgaggaggaactgatagaggac
atgaagctgatgtttcgtaatgctcggcattataatgaggagggatctcaggtatataat
gatgcagatgttttggagaagatactgaaagataagcggaaggagttgggactaccaccg
gaggaggaggatgtgggatcacctaaattaaaattaagaaaaagtggcgtttctccaaag
aaatccaaatacctcacccctctccagcagaaattaaatgagctctacgatgctgtccga
aacttcacagaccgccggggtcgccgtttaagcacgatctttctccgactgccgtctcgc
tccgagttgcccgactactacgcaacgattaaaagacccatcgacatggagcgcatccga
agccacatggtaacaggccgataccaggatgttgaagctctgtttgaggattttgctctc
atgttcaacaacgcctgcatctacaatgagccagagtcactgatctacagagatgctctg
gtgttgcaccgagtgttactggagactcggaagcagcaggagcgaggggaggactccggt
cctcctgctgtgggacctctggtgcgagagctgatcaggaatctgtttgtgtccgtaatg
ggccaccaggatgaagagggccggtgttacagtgactcgctagctgagattcctgctgta
gatccaagcgcacctgaaaagccaacgcttaactttgacatcatcaggataaatgtggag
cggggtctttaccggagactggacatcttccaggagcacatgttcgaggtgttggagaag
gctagaagactaaacaggaccgactctgaggtgtttgaggatgctgttgagcttcagcag
tttttcattaagatcagggatgaactatgcaagaatggagagatcttactctccactgcc
ctcaattacacgttaaagcacctgcacaacgacgtagagcaggataagagggagaaaatt
cctaaagagattgaggaggataagcaaaaaatggaggaagaggagggaaacaaagatgag
aagaaagcaggggacttggagaaagaggcatggcagtctgattcagagtcacagcttgtt
tacagtcagaactgcagctttgagaacagaacttatcatgtgggcgagtttgtttatgtg
gagccatcagaaccaaacctgaagcctcatattgtctgcatcgaacgtttgtgggaggat
gaaataggtgggaaatggctctatggctgctggttttatcgacccagtgagacttttcat
ttggccactcgcaagtttctggaaaaagaggtcttcaagagcgactactacaacaaagta
tctattagtaaagttcttggcaaatgtatggtaatttttgtgaaggattatttcaagatg
ctgcccgagggctttaaactagaggatgtgtatgtgtgcgaatcccgttatgctgccaga
aacaagtctttcaagaagatcaaagtttgggccaagccggagagctctgtgaaactcgtg
cctcgagatgttcctcttcctgttgtgcgtgtagcatccatgtttgccaaacctgacctg
gaaaaaatggcaatgtcatacgcaggcattggaaattttatagaaaaggagagagaagat
gtccctatggagatgagtgcaactgagccagggtgccaatgctatgagcagttacgcttc
aacaaaatgtggttcaaagtgggggactgtgtttacatccaatcgcatggtctgtccaaa
cctcgggttgccaggatagaaaagctgtgggtacagaatggaacagtcttcttatttgga
cccatctttattcatcctgaggaaacggagcatgaacctacaaagatgttttacaagaga
gaagtgtttctgagtcaccgagaagaaaccctgcccatgtctcgtgtcataggcaaatgt
acagtgtcctctttcaaggactacctgtccaacagacccaccgagtatacagaagaagat
atccttctgtgtgagagccgctacattgcgacagagaaaataatgaaaaaattcaagggt
ctgaaacgcttctcatactcctccaaagtggtggaggatgaggtctattacttcaggaaa
ctgatagtgcctcaaaaggaagcgtcaccctttttggacaaaaaaatagatgaacttgag
gtgaaactggcagacatagaggatgcagatgatgacatagacgacatggacgaagatgaa
gacgctccgacgacaccttctatgcctcagatgcaatcctctcttaccagtgacatggac
atcatggcttacacaccttctcaggcaactcctagggtgaaaggtttggcaaagaaggaa
ggagccaaaagaaagatcaacatgagtggctatatcctgttcagcagtgaagttcgagcc
atcatcaaagctcgacaccctgattattctttcggggagctgagtcgtcttgttggcacg
gagtggagaaaccttgaagcttctaagaaagctgaatatgaagagcgtgctgctagaata
gtggagcaacaggaacgtgacaggcccttcaagcaaggttcccccaaagcaggtacccct
gtaggggcactgatgggtgtggtgccttcacctagcactatgggaatgataaaccaatcc
atgacacctgtgtcaggcatgatgggagcttacggcccaccttacatgcccatgcagggc
ccccacgagggtttgctgagtgtggctccaatgccacctcaccctgcagggggtcctaac
ctgcctcttcaccatctccaccaaggcatgccagggtatccaggcatgccacatcaggga
atgatgggagctggtgcaaatggcatggcaggaagtcctgggcaaagcaacttcattcaa
cagcctggtatgttcagtccaggccagaatgcccctccaccatatccaggaccgggccag
ccatcccacttgcaacccaccactccaatgtttgtggcaccaccaccgaaaacacaaagg
gtgcttcactcagaggcctacctgaagtatattgagggattaaattctgagtcgaacact
gtcagcaagtgggaccaaatgctgaaagctcaaagacgtgacgctcacctgaccaaagag
caggagagtcgacttccggcgcactggctgaagagcaaaggagctcacacgaccatggtg
gacgcattgtggcgtttgcgtgacctaatgctgagagattctctgaatatctgtcaggcg
tacaacctctaa
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integrated database retrieval system
