Girardinichthys multiradiatus (darkedged splitfin): 124856370
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Entry
124856370 CDS
T08099
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04217
Necroptosis
gmu04622
RIG-I-like receptor signaling pathway
gmu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124856370 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
124856370 (cyldb)
04625 C-type lectin receptor signaling pathway
124856370 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmu01002
]
124856370 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124856370 (cyldb)
Enzymes [BR:
gmu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124856370 (cyldb)
Peptidases and inhibitors [BR:
gmu01002
]
Cysteine peptidases
Family C67
124856370 (cyldb)
Ubiquitin system [BR:
gmu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124856370 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Pox_A12
Motif
Other DBs
NCBI-GeneID:
124856370
NCBI-ProteinID:
XP_047202697
LinkDB
All DBs
Position
20:41244513..41260720
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AA seq
731 aa
AA seq
DB search
MQSGNSTFFNTERGPDGNSMESKAVSKDRFFIVIRGKSRKGFGRGCIGRVEAETAGGELM
GLLYGCGSNAGSPKSGGLVKAVDTYALTRHQAQLLLYVSSTSKRLEVLSNPQLFSTICEL
SAGDLVVTKHKKGQVPGVVKNLMQIGKKENKGDLKMIGFQVEFMDNENDSLANKLAPLTI
LNAADIIQVVKSYAAHLGLQYRDVKSGGSRSNVVMCGSSMPSIGTSTRQVTKNESEQSVI
HNQTLSTSSVPLEEGSLVEVVNNAGITVYGVIQWLGIPQGKTDIFAGIELDYEVKGCSDG
VYKDQRYFTCKSNSALFVPITKCCPDSRFVCSSPVTKTFKTTNVPPVPPYEDSEEDAPPV
PESEAVSLFVGKMKGIQGHKNSCYLDATLFSLFSSSVTVDAICNKPADKEQPITCILKSI
VNSLRRQGFVPATSVMNFRKKLGCETFSKNEKDPEEFISVLFQKVLCIEPLLKLRSEEGT
SQGAYTLQIFLEKEQMGQIPTVQKLLDTSCMSGNIKFETMPPCLIVQMPRCGNNYKMFSH
IIPSIELDITDLLYNSPRECFICGRMATFECLQCLPDCKLQPGRIKQYCSTCNTQVHTHQ
SRSSHSPKALALPAGVATDAPLPRHTMQLFGVLCIQTSHYVSFVKYGLDSHSWLFFDSMA
DRYGDDQNGYNIPEVRACPELGDFLGQPDEESTRANPALAPELVRRLLCDSYMFLYHSPE
MLVSEPNSGGP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctgggaattcaacattctttaacacagagagggggcctgacgggaactccatg
gagtccaaagcagtgagcaaggacaggttcttcatagtcatccgcggaaagtcgaggaaa
ggtttcggccgcgggtgcatcggtcgcgtggaggcagagacagcgggcggggagctgatg
gggctcctctacggctgcggttccaacgcagggagccccaagagcgggggcttggtgaag
gcggtcgacacgtacgccctgacccgacaccaggcccagctgctgctctacgtctccagc
accagcaaacgccttgaggtgctgtccaacccgcagctcttctcgaccatctgcgagctg
tctgcgggggacctggtagtgacgaagcacaagaagggccaagtccccggagtggtgaag
aacctgatgcaaatcggaaagaaggaaaacaagggggacctgaagatgattggcttccag
gtggaatttatggacaacgaaaacgattccttggccaacaaattagctcctctgaccatt
ttgaacgctgcagacatcatccaggtggtcaagtcttatgctgcccaccttggtctgcag
tatagagatgttaaaagtggtggttcaagaagcaatgtggtgatgtgtgggagctccatg
ccaagtattgggaccagcaccagacaagtcaccaaaaacgaatcggagcaaagcgtcatt
cacaaccagacactgagcacatcttctgtgcctttagaggagggatccttggtggaagtt
gttaacaatgctgggatcacagtgtatggcgtgatccagtggttggggatcccacagggg
aagacggatatattcgctgggattgaactggactatgaagtcaaaggctgctctgatggg
gtgtacaaagatcaaaggtacttcacctgtaagagcaacagtgctttgtttgttcccatc
acaaaatgctgcccggacagcaggtttgtctgctcctctccagtaaccaagaccttcaaa
accacaaacgttcctccagttcctccatatgaagattcagaggaagatgcaccacctgtc
cctgaatcagaggccgtgtcgctgtttgtggggaaaatgaagggtatacagggtcataaa
aactcttgttacctggatgctacgctcttcagtttgtttagttcatctgtgactgtggat
gccatctgcaataagcccgctgacaaagaacaaccaataacctgcattctgaaatcgata
gtcaatagcttacgcagacaaggctttgtgccagcaacgagtgttatgaactttcggaaa
aaacttggctgtgaaaccttcagcaaaaatgaaaaagatcctgaggagttcatttcagtg
ctgtttcagaaggtgctctgcatcgagcctctgctcaagctcagatcggaagaaggaacc
tctcagggagcctacaccctccagatctttctggaaaaggagcagatgggacaaattccc
accgtccagaagctgctagacacatcctgcatgtctggtaacatcaaattcgaaacgatg
ccaccttgtctcatagtccagatgccaaggtgtggaaacaactataagatgttttctcac
atcattccctccatagagctggacatcacagatctcctgtacaactctccaagggaatgt
tttatctgtggacggatggcaacgtttgagtgtcttcagtgtttaccagattgcaagctt
caaccaggaagaatcaaacagtactgcagtacctgtaacacccaggtacatacccatcaa
tcccggagcagccactctcccaaggcgctggctttacctgcaggtgtagccacggatgct
cctttgccaaggcacactatgcagttgtttggtgtgctttgcatccaaaccagccactat
gtgtcctttgtcaagtatggccttgattcccactcatggctcttttttgacagcatggct
gacagatatggcgatgatcagaacggttacaacattcccgaggtccgagcttgtcccgag
ctcggcgacttcctcggccagccagatgaggagtcgacccgggcaaacccagctcttgca
cctgaacttgtccgcagacttctatgcgactcctacatgtttttataccacagcccagaa
atgttggtttcggagccaaacagcgggggaccctag
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