Girardinichthys multiradiatus (darkedged splitfin): 124856453
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Entry
124856453 CDS
T08099
Symbol
lamb1a
Name
(RefSeq) laminin subunit beta-1a
KO
K05636
laminin, beta 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124856453 (lamb1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124856453 (lamb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
124856453
NCBI-ProteinID:
XP_047202822
LinkDB
All DBs
Position
2:complement(43449211..43481923)
Genome browser
AA seq
1797 aa
AA seq
DB search
MLQLRLTALLALQVITCAQEVGDSLGGAPDTISLPEFSDVCTEGSCYPATGDLLIGRAHQ
LSSTSTCGLKRPEPFCIVSHLQEEKKCFVCDSTAPYDDELANHNNSHRVENVVTTFGPNR
LKTWWQSENGVENVTIHLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGKTWEVYRYFA
YDCETSFPSVSHGPMQTVDDVICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSQQIQNL
LKITNLRVKFTKLHTLGDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVEGTG
QIMEGMVHGHCMCNHNTKGLNCEQCEDFYHDLPWRPAEGRNTNACKKCNCNQHSDSCHFD
VAVFMASGNVSGGVCDNCQHNTTGHNCEQCKPFYYQHPEKDLRDPNSCQLCNCDPVGSLN
GGICDGMTNVRVGLIAGQCRCKVNVEGERCERCKPAHYGLSDELEGCKACTCSPLGTAPG
GNPCDSETGSCFCKRLVAGRDCNQCVDEHWGLSNDMDGCRPCDCDLGGAIHNRCDQVSGQ
CVCRDRMFGRRCDQVESGFYFVALDHYTYEAEDAKFGPGVSLVPRPHPHDRSPTWTGVGL
VNVPEGAFLEFSVDNIPHSMEYDILIRYEPQLPDQWEEVLMTVMRPGPIRADSRCVNTVP
DDDNQMISLHPSSRYVVLPRPVCFESGLNYTIRLSLPLYSALSDVHSPYTLIDSIVLMPH
CKSLEIFTSSVGGESSAWETFQRYRCLENSQSVIKTPMTDICRNVIFSISALLHQGAKEC
QCDPQGSLSTVCDPNGGQCQCRPNVAGRNCDRCSPATFQFGPSGCKECACDPQGSQSPIC
DQLTGQCTCVVRAYGRQCDRCLPGHWGFPSCRPCACNGHTETCDAVTGRCIACRDHTTGH
SCDRCLDGYYGNPVLGSGDHCRPCLCPDGPDGLRQFAGSCYRSDTSEQVVCVCNTGYKGA
RCDQCSAGYNGNPDEAGGQCLPCQCNNNIDMLDPESCDARTGECLRCLYHSEGHSCQDCK
LGYYGNALVQDCRKCVCNQLGSDQSSCQSHTDCQCDRSSGQCRCRPNVIGQHCDRCAPDT
WDMSSGAGCQSCDCDPKHSYETSCNEISGQCSCHPGFGGRTCNECRELFWGHPELQCHAC
DCDPRGILEPQCNKVSGHCVCVEGVAGPRCDVCARGFHGTFPDCHQCHQCFSEWDAIIGQ
LTNQTHRLVNKVHAIKASGVSGPYRKSIESMERSAADIQGILDQNPASQPLTEVQHLLQQ
ASDLMAALSQTMNNTEETLALVGEQDSGIKTKLDSVTSDAQKLEQTVQELLDQVEFIKNS
DIRGATDSVTKYFLQSQAAEARANSSTINAGSPVETSAALRQLAEDKLNQTREEFLERHS
ENARRLDNLAGEMETLDLSVISYKTCGSPSSGQDSCRSSSCSGLGCVDPESQAWCGGEGC
DGAVTAAKSILMKTQEAEQEIISAMAEVEKLSKMVLEVKMQADEAKLSAQNVLMKTNRTK
HKVDQSNNELRSLIRQIKDFLTQDAADLESIELVASEVLAMQMPTTPAQLQNLTDEIRQK
VGELGHVEAILQQSADDIQRAETLLDQARQASKQATDVKDSAERVKQALEEAQRAHTAAS
SAIQQATSDIKTTTKLLSSVETETANAESKLYNATQRLQRLEQDVKLLTDKSANVTQRAK
LTDQNAADIGRVAEEIQKELESEVKQKYSTVEQLIGQKAGGVADAKKRAESLQNEAKQLL
LQASDKLQLLKDLEKSYDDNQRALEVKAEQLVELEAAVKELLQEISHKVTVYSTCLF
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagctccggctcacggcgctgcttgctctgcaggtgatcacctgtgctcaggag
gttggagactcactgggcggagccccagatacaatcagcctcccagagtttagcgacgtg
tgcactgaaggcagctgttacccagcaacaggggatcttctgattggccgagctcaccag
ctgtcatccacctctacctgtggactgaagcgcccagaaccgttttgcattgtcagccac
ttacaggaggagaagaagtgctttgtgtgtgactcaacagcaccgtatgatgatgaactg
gccaatcacaacaacagtcaccgggttgaaaatgtcgtcaccacatttggtcccaacagg
ctgaagacctggtggcagtctgagaacggtgtggagaatgtcaccatccacctgaacctt
gaagccgagtttcacttcactcatctcattatgaccttcaagacatttcgaccggctgcc
atggtcatcgaacgatcatcggacttcgggaaaacctgggaggtttaccgttactttgcc
tatgactgcgagacgtcctttccgtctgtttcccatggtccgatgcagacggttgatgat
gtcatctgtgattcccgttactcggacattgagccatccactgagggcgaggtgatttac
agagtcctggatccagcgtttcggattgaagacccatacagtcaacaaatccagaacttg
ctgaagatcaccaacctgcgggtgaagttcaccaaactgcacacgctcggggacaacctg
ctggactctcgaatggagatcaaagagaagtactactatgccatctatgacatggtggtc
agaggaaactgcttctgttacggacatgcctctgaatgcgcacctgttgagggaactggc
cagatcatggagggcatggttcatggtcactgtatgtgtaaccacaacactaaaggacta
aactgtgaacagtgcgaggacttctaccatgaccttccctggagaccagccgagggacgc
aacaccaacgcctgcaaaaagtgtaactgtaaccagcactcggactcgtgtcacttcgat
gtggctgtgttcatggcctctggaaacgtcagcggaggagtttgtgataactgtcagcac
aacacgaccggacacaattgtgagcagtgcaaaccattttattaccaacatccagagaag
gacctcagagacccgaacagctgccaactctgtaactgtgaccctgtgggctccctgaat
ggaggaatatgcgacgggatgacgaatgtccgagtcggtctgattgctggtcagtgccgc
tgtaaagtcaatgtggagggagaacgctgtgagcgctgcaaaccggcgcattacggactc
agtgatgaacttgaaggctgcaaagcttgtacctgcagccccctgggaacagctcctgga
ggaaacccctgtgacagtgaaacaggaagctgtttctgtaaacgtctggtggctggacgg
gactgcaaccagtgtgtggatgaacactggggcctcagtaacgacatggatggctgcaga
ccatgtgactgcgatctgggaggagccatccacaaccggtgtgatcaggtgagcggtcag
tgtgtttgcagggatcgcatgtttggtcgtcgctgtgatcaggtggagtctggattctac
tttgttgctcttgatcactacacctatgaagctgaagatgccaagtttggacctggagtg
tcattggtccctagaccccaccctcatgaccgcagtcccacctggacaggtgttggcctg
gtcaatgttcccgaaggggccttcctggagttctctgtagacaacatcccccattccatg
gagtacgacattctcattcgctatgagcctcagctgccagaccaatgggaagaggttctg
atgacagtaatgaggcctggaccaatcagagctgacagccgatgtgtcaacacggtccca
gacgatgacaatcaaatgatctcccttcaccccagctcacgctacgtggttctgccgagg
ccggtttgttttgaatctggactgaactacacgatccgtctcagtctcccgctgtactct
gctctcagtgatgtccattctccgtacacactcatcgattcgatcgtgctgatgccgcac
tgtaagagcctggaaatatttacgtcctctgtgggaggggagtccagcgcttgggaaacg
tttcagcggtatcgatgtctagagaacagccagagtgtaattaagaccccgatgactgac
atctgcaggaacgtcatcttcagcatctctgccctgctgcaccaaggagcaaaagaatgc
cagtgtgacccccagggctccctcagcacggtgtgcgatcccaatggtggccagtgtcag
tgccgacccaatgtagcgggcaggaactgtgacagatgttctccagccacgtttcagttt
ggaccgagcggctgcaaagagtgtgcatgtgaccctcagggttcccagagtccgatctgc
gatcagctgaccggtcagtgcacctgcgtcgtcagggcgtacggtcggcagtgcgatcgg
tgcctgccgggtcactggggcttcccgtcctgccgaccctgcgcctgtaacggacacacg
gagacctgcgacgccgtcaccggccgctgcattgcctgcagggatcacaccaccggacac
agctgcgacaggtgtctagacggttactatggcaacccggtgctgggatcgggtgaccac
tgtcgtccatgtttgtgtcccgacggccccgacggtttgcggcagtttgcaggaagttgt
taccgtagcgacacctctgagcaggtggtgtgtgtctgcaacacgggatacaagggtgct
cgctgtgatcagtgttcagctggttacaatggaaaccctgacgaggcaggtggccagtgt
ctcccgtgccagtgcaacaacaacatcgacatgctggacccggagtcctgtgatgccaga
accggcgagtgtctgcgatgtctgtaccacagcgaaggccactcttgccaggactgcaag
ctgggttactacggcaacgccttggtgcaggactgcaggaagtgcgtctgtaatcagctg
ggcagcgaccagtccagctgtcaatctcacaccgactgccagtgcgaccgcagcagcggt
cagtgtcgctgccggcccaacgtgatcggtcaacactgcgaccgctgcgcgcccgacacc
tgggacatgtccagcggagccggctgtcagagctgcgactgcgaccccaaacactcttat
gagacgtcctgtaatgagatcagtggccagtgttcctgccatcctggtttcggaggaaga
acatgtaacgagtgccgagagctgttctggggccacccagaactccagtgtcacgcatgt
gactgcgaccctcgtgggatcttggagccacaatgtaacaaagtcagcggtcactgcgtc
tgcgtggagggcgtagcgggacctcgctgtgacgtctgcgcccgcggcttccatggaacc
ttcccagactgtcatcagtgccaccagtgtttctcagaatgggacgccatcatcggtcag
ctgaccaatcagacacaccgactggtcaacaaggtccacgccattaaagccagcggagtc
agcggaccatacaggaagtctatagagagcatggagagaagtgctgcggacatccagggc
atcttagaccaaaacccggcctcacaacctctgactgaagtccaacacctgctgcaacag
gccagcgacctgatggcagctttgagtcagaccatgaacaacactgaggagactctggct
ctggtgggtgagcaggactctggcattaaaactaaactggactccgtgacgtctgatgct
cagaaactggagcaaacagttcaggagctcctggaccaagtggagttcatcaagaactct
gacatcagaggggcaacagacagcgtcaccaagtacttcctgcagtctcaagcagccgag
gctcgagccaattcctcaaccatcaatgctggcagcccagttgaaacttcagctgcccta
cggcaactcgccgaggacaaactgaaccaaaccagagaggagtttctggagagacactct
gaaaatgctcggaggctggacaacctggcaggagagatggagacgttggacctatcagtg
atcagctataagacatgtggcagtccatcatctggtcaagactcctgtcggtcttcatcc
tgcagtggtctgggctgtgtagaccctgaaagtcaggcctggtgtgggggagaaggatgt
gatggtgcagtgacagcagccaagagcatcctgatgaagactcaagaggctgagcaggaa
atcatcagtgccatggcagaggtggagaagctttcaaagatggtgttagaggtaaagatg
caggctgatgaagcgaagctgagtgctcagaatgtcctgatgaagaccaacagaaccaaa
cacaaagtggaccagagcaacaatgagcttcgaagcttaatcagacaaatcaaagatttc
ctcacacaggatgcggcagacttggagagcatcgaacttgtggcaagtgaagttctggcc
atgcagatgccgaccacaccggctcagctgcagaaccttacggacgagatccggcagaag
gtaggagagttgggacacgtggaggcaatcttacagcagagcgctgacgacattcagaga
gcagagactctgctggaccaggcccgccaagcaagtaagcaggcgacagatgtgaaggac
tctgcagagagagtgaaacaagctctggaagaagctcagagagctcacacagctgccagc
agtgccattcagcaggccacctccgacatcaagaccacgaccaagctgctctcctccgta
gagacagagacggcaaacgcggagtccaagctgtacaacgccacccagaggctgcagagg
ctcgagcaagatgtgaagctgctcaccgataaatcggcgaatgtcactcagagagccaaa
ctgaccgatcaaaacgctgcagacatcggaagggttgcagaggagatccaaaaggagttg
gagtcagaggtgaagcagaagtacagcacagtggaacagctgataggtcagaaagcaggg
ggtgtggccgatgctaagaagagggcggagtcactgcagaatgaagccaaacagttgctg
ctgcaggccagtgacaagctgcagctgctgaaagatctggaaaagtcatatgatgacaat
cagcgagctcttgaggtgaaagctgaacagttggttgagctggaggcagctgtgaaggag
cttctgcaggaaatcagccacaaggtcaccgtctacagcacctgtttgttttag
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integrated database retrieval system
