Girardinichthys multiradiatus (darkedged splitfin): 124856592
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Entry
124856592 CDS
T08099
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124856592 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124856592 (smarcd1)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124856592 (smarcd1)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124856592 (smarcd1)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124856592 (smarcd1)
PBAF complex
124856592 (smarcd1)
GBAF(ncBAF) complex
124856592 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
124856592
NCBI-ProteinID:
XP_047203163
LinkDB
All DBs
Position
20:7498374..7515532
Genome browser
AA seq
515 aa
AA seq
DB search
MAARGGFQSVPTAGGGGAMGPGPPVPGAAPGMGPGTPSGRMGPTSGAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGGSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDFKTMTDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagagggggctttcagtcagtaccaactgctggtggcggtggagcaatggga
cctggaccaccggtaccgggcgcagcgccaggtatgggacctgggactccatctggaaga
atgggcccgacgtcaggtgcacagaaccacatgtaccgctctccgatgcccgggcctggg
tacccgagaccaggcatgcctccatccagccgcatgaccccgcagggacccgccatgggc
ccaccaggatatggcggcagcccggtgtctcgtcctgggatgcctggcgtgatggaccca
tcccggaaaaggccagcccctcagcagatccagcaagttcagcaacagcagaaccgcaac
cagcatacaaagaagaagaagatggctgataaaattctacctcagaggatcagagaactg
gtcccagagtctcaggcttacatggatcttctggcttttgaaaggaagctggatcagacc
atcatgcgcaaaaggcttgacattcaggaggcccttaaaaggcctataaagcaaaaaaga
aagcttcggatttttatatccaacaccttcaaccctgcgaagcctgatgctgaggatgga
gagggcacagttgcatcatgggagctgcgtgttgaagggcggctcttagaagatactgcc
gtgtccaagtatgaagcaaccaagcaaaaaagaaagttttcctccttctttaagtccctt
gtaatcgaattggacaaagacctgtatggaccagataaccaccttgtggaatggcacaga
actgccaccacccaggagacagatggtttccaggtgaagaggcccggtgatgtgggagtt
cgatgcaccgtcctgctcatgctggattaccagccccctcagttcaagctggacccgcga
ctggcccgcatgttgggtatccacacccagaccagacctgtcattattcaggctttatgg
cagtatgttaaaacacataaactccaagatccacatgagcgcgagttcatcaactgtgac
aaatacctccagcaaatttttgagactcagcgaatgaagttttccgaaatcccacagcgc
ttgcacgcactgctgatgcctccagaacccatcatcatcaaccatgtgatcagtgtggat
cccaatgatcaaaagaagacagcttgctatgacattgatgtggaggtggatgacacgctg
aagacccagatgaactcattcctgctctccacagccagtcagcaggaaattgctggattg
gataacaagatccatgaaactattgagaccatcaaccaactgaaaacccaaagggagttc
atgttgagttttgccagggatcctcagggttttatcaacgactggcttcagtcccagtgc
agggatttcaagacaatgacggatgttgtgggaaacccagaagaggagcggagagcagag
ttttactaccagccgtgggctcaggaggcagtgtgtcgctacttctactccaaggtccag
cagcggcggcaggagctggagcaggcgcttggaatcagaaacacttga
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