Girardinichthys multiradiatus (darkedged splitfin): 124856722
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Entry
124856722 CDS
T08099
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu00310
Lysine degradation
gmu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124856722 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124856722 (prdm2b)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124856722 (prdm2b)
Enzymes [BR:
gmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
124856722 (prdm2b)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
124856722 (prdm2b)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124856722 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_11
zf-C2H2_3rep
Zn_ribbon_PaaD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
Carbpep_Y_N
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
124856722
NCBI-ProteinID:
XP_047203454
LinkDB
All DBs
Position
20:19719949..19743596
Genome browser
AA seq
1714 aa
AA seq
DB search
MGGEKAPQTTLLRSSSIGGREREKRGEDGLHTARVRIMAFTQGSVECLEEIPAHVWSSLP
DYLNLGQSAVNPSRIGVWATKMIPKGKRFGPFVGEKKKRSQVTSNVYMWEVYFPARGWMC
IDATDPLKGNWLRYVNWARSSAEQNLFPLEINRAIYYKVLRPIGPGEELLVWYTVEDNPE
ITAALEEERASRRSSPRSKRARRKLVDKSRQAGLGGFKKTSGTKTTVRQMWEGGESLKEE
GERQPETSQELHEAHPLGSTNHKHLQDMSASAMDSGNYEEEEEEENGYDAREMQHKTSKQ
LSEQSCSSLSASGESHKDPQESPPLAERAGEPEHDPDGELEEDLQGEAYPCEHCERHFTS
RQGLERHIHIHGNINQQAHVFKCRYCNKPFSSQVGRRRHERRHENGSKKMPGSQAGVAGL
LSPAAQTDSSPDCTSPTSQYVAIRSQFTGGQVKNSEMQRKELGPHTNRPSMFDENGESKE
LHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQEASAQQAGESPGTIPPPV
YMPSADTEDEADRDDYAVDISKNISENLSFYIDGKIVSTSAASTCEVIEVDTRSAALFGL
DTVIINPNQISQALKVEARTSAGKPVSSNEQPAAKRRTSTPPLVTGLKVETEAAPSPSSS
TSSSSNLLVGGLFQQDSLTLQREKTIYLSPKLKQLLQTQDFQKSTIALITESHRLPTLPG
ASGKFKRRTGSPPSSPQLSPTATTESCKTEAVSGNVLKVPKLENHSVLSPESLLDEDDGD
SPSSSGNQASSSDGGSSCNQQPLDLSSSVSRRSDGSDEVTSDSALDLSVHRKTSVEPDVK
GSPAPQPLIKKKKPNTSMLEKVLMNKYVGLTLPGEEGPSTLANLNCFRTQSPNVASESAH
PSPPSLTPVTINPSSPSSCSVTSQTPPPPVLPTIPSPPMLPGSPQASDSPAQRPLPVLSP
KMSPTSDEHKSLSDSIENFSSEENEDEEESHISEPQVYPSTPLKTPCNQPVTSSPPGPTS
VDLLAKEDVDVSLSAVCNSLTNGSLTRDTVEETKMSLKANFAALTPQPELPSSSKSPPLA
SHKSSSSAGLQSPPQIEVKEEPLPSEDDLSVANHSPHASAESSPLPADLEKLSYKTPEAE
EADSTYCKTFVCNVCEEPFDSIKDLSRHITDHAADWPFKCEFCVQLFGDEAAVLAHRTTL
HGVGRIFLCSVCSKEFAFLCNLQQHQKDLHPNELCTHTTVESGKLRPQNYTDPSRAKEES
APSTPVPGTPNENDLMAKEEAGVNGNNPEDPNEELYTTIKIMASEGGKPKGPDVRLGINQ
HYPSFKPPPFPYHSRSHTAAVASATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHIL
VCANASDKKRYTPKKNPIPLKQIVKSPNGVVSSTAAAEAAAAAEAAAVTVQSAFRRMGQP
KKLNFNQDTGKTKMSALSKKKNQLVQKAISQKNKAVSTAKKAAVKAEEEPVSNVCPHCSR
AFTYTASLNKHMAVSCPMKPVVAKKGRKGLAEVKKEPVSLVDKNTNKKRLSEGDVQTVAE
AKPPGKRRARGLNAADPESTEASKGKPPSAVGRLKRPASLSAPVSARKKLKKGQAQALPP
PTPAADTPSDTAQRPTMRMQRMGKKPAAKRSAEVKPPPAPQLKKEERVSLRKRDRAGGPV
TRSSQMANAAPPAEVKTEEQPMQETTDPLEVPMK
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggggggagaaaaggctccacaaaccaccttactgaggagcagcagcatcggcgggaga
gagagagagaaaaggggcgaggacggtctccatacagccagggtgcggatcatggctttt
actcaagggtcagtggagtgtctagaggaaattcctgctcatgtgtggagcagcttgcca
gactatctgaatctcggacaatcagctgttaatccgagccgcatcggtgtttgggccaca
aaaatgatcccaaaggggaagaggtttggtccgtttgttggagagaagaagaagaggtcg
caggtgaccagtaatgtttacatgtgggaggtttatttcccagctcggggatggatgtgc
attgatgccacagaccccctgaaggggaactggctccgatacgtgaactgggctcgatcc
agtgcagagcagaatctgtttccattggagatcaacagagccatttactacaaagttttg
aggcctatcgggccgggagaggagctgctggtgtggtacactgtggaagacaaccccgag
ataacagctgcactggaggaagaaagagccagcagaaggagctcacccaggtcgaaacga
gctagaagaaagttggtggacaaatccagacaggctggtttgggtggattcaagaaaaca
agtggaaccaaaactactgtcaggcaaatgtgggaggggggagaaagtttgaaggaggag
ggtgagagacaaccagagacctctcaggaactccatgaagcccatccattaggaagcacg
aaccacaagcatttgcaggacatgtctgcatcagccatggacagcggaaattatgaggaa
gaagaggaagaagagaacggatatgatgcgcgtgaaatgcagcacaaaacctcaaagcaa
ttgtccgagcagtcctgctcgtcactatctgccagtggagaaagccataaggatccccag
gaaagtcctccgcttgcagagcgggctggagaacctgagcatgaccccgatggggagctt
gaggaggatctacaaggagaagcgtacccctgtgaacactgtgagcgccacttcacctcc
agacagggtctggagcgtcatatacacattcatggcaacatcaaccaacaagcacacgtc
tttaagtgccgatactgcaataagcctttcagctcacaggtagggcgccgacggcatgaa
aggaggcatgaaaatggatcaaaaaagatgcccggctctcaggctggagttgctggcctc
ctcagtcctgcagcgcagactgattcaagtcctgactgcaccagcccaaccagtcaatat
gtagccataaggtcccagtttactggaggacaagtaaaaaattctgaaatgcagagaaag
gagttaggaccccacactaatcgtccttcaatgtttgatgaaaatggggagtcaaaggag
ctccatccctgcaagtattgtaacaaagcgtttggcactcacacaaacatgcgcagacac
cagcgcagaatacacgaacgacacttgttgccgaaaggagttcgcaggaaaggcatgctg
ctgcaggaagcatctgcgcagcaggcgggggagtcccctggcaccatcccccctcccgtc
tacatgcccagcgcagacacagaggacgaggccgacagagacgattacgctgtcgacata
tccaaaaacatttccgaaaacctcagtttctatattgatggcaagattgtgtcaaccagt
gcagcgagcacctgtgaggtgatagaagtggacacgaggtcagcagctttgtttggtctg
gacacggtcattatcaacccaaatcagattagtcaagcactgaaggtggaggctagaacg
agtgctggaaagccagtctccagcaatgagcagcctgcagcaaaaaggagaacatcaaca
ccccctcttgttactggtctgaaggtagagacggaagcggctccatcaccttcatcctct
acgtcttcctcatccaacttgttggtgggaggacttttccagcaagattcattaacactt
cagagggagaaaaccatttatctctcacctaaactcaaacagctccttcagacacaagac
ttccaaaaatcaacaatagccctcattacagagagtcacagactgcccacgcttccaggt
gcttcaggaaagttcaaaagaaggacaggttctccgccttcatccccacagctcagtcct
acggcaacaactgaaagctgtaaaacagaagcggtgagcggaaacgtcctcaaggtgcca
aaactagaaaaccatagtgtgctgtctcctgaaagcctcctggatgaggatgatggggat
tctccaagctcctctggaaatcaagcctcctccagcgatggaggaagctcctgcaaccag
cagcccttggatctgtccagctctgtcagccggcgaagcgatggctcggacgaggtgact
tcagattcagctctggatttaagtgtgcatcggaaaacctctgtagaaccagatgtaaag
ggaagtccggcgccacagccgctgataaaaaagaaaaagccaaacaccagtatgctggaa
aaggtgctcatgaacaagtacgttggtctgactttaccaggagaggaggggccttcaacc
ctggcaaacctaaactgttttcgtactcagtcgccaaacgttgcatcggagtctgcccac
ccatctccaccctcccttaccccggtcacaattaatccctcttcgcccagctcctgcagc
gtaacctctcaaacacctcctcctcccgttctccccaccataccatctcctccgatgcta
cccggctctcctcaggcttcggactcacccgcacagagacccctccctgtcctctcacca
aaaatgtctccaacatctgatgaacacaagtctctgtcagattccattgaaaacttctca
tctgaggaaaacgaggatgaagaggagagccacatttctgagccacaagtttacccaagc
actccactcaaaactccttgtaatcaaccagtgacatcaagtcctcctgggcctacatca
gtagatcttctggctaaagaagatgttgatgtttctctttctgcagtatgtaacagtcta
acaaacggcagcttaacccgggacactgttgaagaaacaaagatgtctttgaaagctaac
ttcgctgctctcacccctcaacctgaactgccatcatcttccaaatctcctcctcttgca
tcacacaagtcatcttcatcagcaggtttacaatctccccctcagattgaagtgaaagag
gagcctctgccctctgaagatgacctgtctgttgcaaaccactcgcctcacgcgtctgct
gaatcctcacctctgcctgcggatcttgaaaaactgtcctataaaaccccggaggcagag
gaagccgactcaacgtattgcaagaccttcgtgtgcaacgtgtgcgaggagccgttcgac
tccatcaaagacctcagcaggcacatcacggatcatgccgcggactggccctttaaatgc
gagttttgcgtccagctgttcggcgacgaggcagccgtgctggcccaccggacaacgctg
cacggggtgggtcggatcttcctgtgctctgtctgttccaaagagttcgccttcctctgt
aacctccagcagcaccaaaaagacctgcacccgaacgagttgtgcacacatactactgtt
gagagtggcaaactcaggccacagaattatactgatccgtccagagccaaagaagagagt
gctccctcaacaccagtgccaggaacgccgaatgaaaatgacttgatggcgaaagaggag
gctggcgtgaacggtaataatccagaggatcctaatgaggagctgtacactacgattaag
atcatggcttcagagggagggaagcctaaaggtcctgacgttcgacttggcatcaatcaa
cactatcccagtttcaaaccaccacctttcccctaccatagccgttcccacactgctgcg
gtggcctctgctacaaacttcaccacccacaacataccgcaaaccttcagcactgccatc
cgctgcaccaagtgtggcaacagctttgacaacatgcccgagctgcacaagcacatactg
gtctgtgccaacgccagcgataaaaagcgttacactcccaagaaaaacccgattccgcta
aaacaaatagtgaagagccccaatggagtggtgtcgtccacagcagcagccgaagcagca
gcagcagcagaggctgccgctgtcacagttcagagtgctttccgtcggatggggcagccg
aagaaactcaacttcaatcaggatacaggaaaaacaaaaatgagcgccctcagtaagaag
aaaaaccagctggtccagaaggcgatctcgcagaaaaataaagcggtcagtactgcaaag
aaggctgctgtcaaagctgaagaggagccagtctctaacgtctgcccccactgcagccgg
gcgttcacctacacggctagtctgaataaacacatggcggtcagctgtccaatgaaaccg
gtcgttgctaaaaagggcagaaagggtttggcagaggtgaaaaaggagcctgtttcttta
gtggataaaaacacaaataagaagagactttcagagggtgatgtgcaaacagtggcagag
gctaaacctcctggaaagagaagagcccgtggtttaaatgcagcagaccctgaatccacc
gaggcaagcaaaggaaaacccccttctgcagtgggccgattaaaaaggcccgcctcgctc
tctgcgcctgtttctgcccgcaaaaaactcaaaaagggccaagctcaggccctacctccc
cctaccccagccgcagacactcccagtgacacagcacaacggccaaccatgaggatgcag
cgcatgggcaaaaagccagcagctaagagatcagcagaggtcaaaccaccgccagcacca
cagctgaaaaaagaggagcgggtctccctcagaaagagggacagagcaggggggccagtc
accaggagctcacagatggccaacgctgctcctcctgctgaggtgaagactgaggagcaa
ccgatgcaagagacgacagaccctctggaggtgccgatgaagtaa
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integrated database retrieval system
