Girardinichthys multiradiatus (darkedged splitfin): 124856850
Help
Entry
124856850 CDS
T08099
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04217
Necroptosis
gmu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
124856850 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124856850 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124856850 (rbck1)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
124856850 (rbck1)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
124856850 (rbck1)
Multi subunit type E3
LUBAC complex
124856850 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
Zn_ribbon_RanBP
zf-C3HC4_2
zf-RING_2
zf-C3HC4
IBR
zf-RING_5
ubiquitin
zf-RING_11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
124856850
NCBI-ProteinID:
XP_047203712
LinkDB
All DBs
Position
20:complement(14918353..14929075)
Genome browser
AA seq
516 aa
AA seq
DB search
MASEDLQRRNLKEAEELAFSLGEAISSGESEEAANLCKKLSQLSVTVSVNIKSHVYPQDS
IRLMVGVEDAQSENYIPVTLAVSTGMKIAELKDKISHDFGFHPTLQRWVIGKRLAHDQET
LYSHGIRKSGDQAFLFILSAQAAQLTRQQHNQDQEQQRFASIVESMQSIQLYPRGVGGDD
KTAPPPVLPKNKATPQPAVAAKPQLGWACTMCTYVNKPTRPGCEMCGGDRPQDYKVPDIY
QPDQEEVLRIEQERLALLQYEEAQQLEREKNYMYLLATDEQNLISNTTETDCPICFSTLE
QGEGVVLRECLHTFCRECLKGTVINSQDAEVYCADTDCESKLLDREIKELLTEEEHQRFL
ELRLNIAESRSEHSFHCQTPNCRGWCIYEDEVNEFNCSLCNEINCILCRAIHKDMNCKDY
QDDLRIRAENDKAAQQTKQMLENMLQNEEAMKCPRCDIIVQKKDGCDWICCLMCKTEICW
VTKQARWGPNGHGDTSGGCGCRVNNKPCHPNCQNCH
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaagatttacagagaaggaacctcaaagaagcagaggagctggccttctct
ctgggcgaagccatcagcagtggcgaatctgaagaggcagcaaatctgtgcaagaagctt
tcccagctctctgttacagtgtcagtcaatatcaagagccacgtctaccctcaggactcc
attagattgatggttggtgtggaggatgcccagtcggaaaactatatcccagtgactctt
gctgtttccactggcatgaaaattgcagaacttaaagataagatcagtcatgactttgga
ttccacccaacactccagcgctgggtgatcggtaaacgcctagcccacgatcaggaaact
ttatacagccacggcatccgcaagagcggagatcaggctttcctgtttatcctctctgcc
caggcagcgcaacttacacggcagcaacacaatcaggaccaggaacagcagcgtttcgct
agtattgtggaatccatgcagtcaatccagctttaccctagaggagtgggtggtgatgac
aaaactgctcctcctcctgtacttcctaaaaacaaggctactccccagcctgctgtggct
gctaaacctcagttgggctgggcctgtacaatgtgcacatacgttaacaagccaacccgc
cccggctgtgagatgtgtggaggggacaggccacaggactataaggtgccagacatctat
cagcctgaccaggaggaagttttgcgcattgaacaagaacggctggccttactgcaatat
gaagaggctcagcagctggaacgtgagaaaaactacatgtacttgttggccacagatgag
cagaacctcatttctaataccacagagacagattgtcccatctgcttctccactctggag
caaggagagggtgttgtgcttagagaatgtttgcacactttttgcagggagtgtctcaaa
gggactgtcataaacagccaggatgcagaggtgtattgtgcagacacggattgtgagagc
aaattattggaccgagagataaaagagttgctcacagaggaggagcaccagcggtttctg
gagctgcgtttgaacattgcagagagccgctccgagcacagcttccactgtcagactccc
aactgtcgagggtggtgcatctacgaggatgaagtcaatgagttcaactgcagcctctgc
aatgaaatcaactgcattctctgtcgggccatccacaaagacatgaattgtaaggactac
caggacgacctgcgcatccgagcagagaatgacaaagcagctcagcagaccaagcagatg
ttagagaacatgttgcagaatgaagaagccatgaaatgcccacggtgtgacatcatcgtc
cagaaaaaagatggctgcgattggatctgttgtctgatgtgcaagacggaaatctgctgg
gtcaccaaacaagctcgatggggaccaaatggacatggcgatacatccggtggttgtgga
tgtcgggtcaacaataagccttgtcatcccaactgtcaaaactgccactaa
DBGET
integrated database retrieval system
