Girardinichthys multiradiatus (darkedged splitfin): 124856893
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Entry
124856893 CDS
T08099
Symbol
stab1
Name
(RefSeq) stabilin-1 isoform X1
KO
K19020
stabilin-1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124856893 (stab1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124856893 (stab1)
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Hyaluronan
Cell surface receptors
124856893 (stab1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
EGF_STAB1-2
Xlink
cEGF
FXa_inhibition
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
124856893
NCBI-ProteinID:
XP_047203796
LinkDB
All DBs
Position
20:3319425..3420460
Genome browser
AA seq
2549 aa
AA seq
DB search
MLLFLLLLVDFCTQTSGQQQTAPPGRCDVPQRLTVHTDCSSCAVSITANCPQGFTKLDTT
NCSYVVQIGGREVELEGCQHLCVENVMHPQCCPGHWGPLCLSCPSWSGKTCNFNGVCVDG
DVGNGTCICDEGFSGFACQDCKNPNAFGKKCDKVCDCVHGVCNKGPDGDGQCLCQPPYTG
RRCDQVSRGCRGCSSFSYCKGEEEEAGCDCLPGYRRMKENKCLVSCSQRDCDVNAQCSTQ
ASNIKCTCKPDYEGDGKICVPKNPCLENNGGCPINSTVCVFKGPNKSSCECMFGMSPVGG
SPEYGCQLVSACSADTCDPTAVCQTELDGKARCLCDPRKIGDGRRCYGNLMERLIELDSR
GDHRENLTGAVGLFERGCSLVLSHSGPFTAFFPLLKQPLTGVNEEVVCKNHLILGQHLYK
ALEGRDLNLYGGEKLRVKVNKHFILMSDPSRLYTIIQSDLPAANGIIHIIDRPITNSLPN
GPPRDERFADKTIGEILRKDGKFNRFLSLVDNCGSPPPLHGAGPLTVFVPTNEAVDQARD
GSILYMLNDAKDKLQELLRHHVFSQAVLTVDELAALSHVRTMANQLVTISVSDDGEILLG
EKRVRLASTNIMASNGVIHMIDGLLYPPSILPILPHRCDVIKSKVTVGPCVHCSYLHETQ
CPEGSVEMESHQIGCEYANLPLGPTHNKGCAKYCNATKQVAECCKGFYGPDCKPCIGGFQ
HPCYDKGTCVDGIHGNGSCSCHSNFKGLACHICSDPSKHGDNCDEECRCVHGVCDNRPGS
GGVCRRGSCLEGFSGDYCDKKATSCNVDGLLAHCHIHAYCTHTGLDYKCLCRDGYNGDGH
SCSPINLCLKSSRRGCDTNAECVYVGPGNVSCVCTDGWTGDGKVCVEINNCQLEDRGGCS
PNADCNHIGPGQSECVCKTGYMGDGKVCDLINPCLTNNGGCHKLAKCELKDDGVHHCSCP
DGYAGDGNQCFGFLLDELDMNLQLYSFFRLIQKFGHSSEDLSGNLTILAPSREAIMIMSK
AENSFWTTRHRLPHFLRAHYLLGVYSVEDLDNLLGHRLPTLNPSTKWEIRNVSGMLCIGN
ASIITHNLPAINGYIHVINQVLAPSRSDLPPEPPTVMAFLNSSSFSLFREYALTYNLSEH
LGGLDFTLLLPTDEAVRNHLSRTNSSFLDSDVFQYHVILNELLFPDHLHDGMLRSTLLGP
DYQVQFHLTDKNQTAVNDVPLNGSFIETQYGVVIILQQVLKVRRNRCSQQVSLQSKGRCS
DCDGPPRCLFNYSPIREQFPANMKPNCFYRKRVGPRRTFVPGCIINCLRHTMDHSCCPGF
YGHECFKCPGDDRSPCSNHGQCQDGNHGNGECQCYEGFHGTACEDCEPGRYGLNCSSKCS
CDHGKCDDGLTGSGRCLCYKGWKGASCSVEIRNDACGDVCDENANCVTGPQGSAAVCVCA
AGYEGNGTFCRELDLCSRSNGGCSEFAVCTKVSPGERTCACKKGYTGDGVVCLEIDGCLV
NNGGCHTAAECIRTGPNVTACRCQTGFEGSGRFCYPVNPCRTDNGGCSKYALCKYTGQGQ
RNCTCRGGHVGDGFNCRGSTNIEVYGQSENDFFRKMLFMSETPGLYGNGPFTIFVPLQET
NNESTINEWKRAGRLEHMIRYHIVSCEILTLSDLKTTKSVVSLSGYSLEFSLKEGSVWIN
NRSMVVKSDYTTSNGVIHHIDTLLTPYRLQDKPQLESKTMNFSTAATFYGYGRFYKLIED
AGLLPVLQMPIHQPFTIFWPTDKALDSLPRERHHWLVNPDHRDQLAATVKAHIIRNSRLT
GVGQPNKLMSYRTMHGSTIKLSCDKKLVGSVLINENAARLVERYMAFKEGLGFGIDQLLE
PPGLGAFCDSVQNKTTFGRCGTCLFPPFCPLKHADTGRTIRCLRYPSRYRTSYFGWYDLD
DRFSRKSCKRVCQFPSWVQKCCKNHYSRDCQVCPGGVEDPCSSHGDCDDGVTGSGACKCH
KGFKGKACDLCAGGYYGTNCTACSCVKGSCSDGMDGTGQCVCQPGWEGDRCQNKIGSVSE
KCRQCHAQAMCVSGVSCQCKPGFEGNGTFCSPVPPPDLCSEYNGGCDLNADCNQSGLIVN
CTCRSGYQGDGFSCEPINRCVEEQNGGCSDFAACKFTGPNERECECLPGYVGNGVQCLEK
VEPPVNRCLEENGGCNPVATCSDLHYHANTAGVFHLRSPEGRYKMNFTQADIACQAEGAT
LATFKQLGDAQQLGMHLCVAGWIEGGRVGYPTRFPSTNCGDNHVGLVMYKDPVDQRSKYD
AYCYRLKEVSCSCPEGYVGNGDFCNGVLTSVLATNGNFSIFYKLLLDYSGSSSDGQQLIN
VLDHRKSEVTLFVPHNSGFTQNQTLSGRDLEYHISTNHSIRPYKELRHQEVISSMLGFNL
TVTYGNNESCKLVNQRLLLEWDIPAVNGIIHVLEAPLTAPAPPVIHSSSRGHAHSSGIVS
AILVSLLACVLAALGYYLFRHKMDAFRFHYFKNEDEDAAAGGPTKPTLISIPNPLYSGSR
AFTEPFGETSSAAEPAEPKEPPNILDLDQ
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgtttctgcttctgttggtggatttctgcacccaaacttcaggacaacaacag
actgctcctccaggtcgctgtgatgttcctcagaggttaaccgttcacaccgactgcagc
tcctgtgctgtcagcatcactgccaactgtccgcaaggcttcaccaagcttgacaccacc
aactgcagttatgtggtgcagatcggcggcagggaggtggagcttgaaggatgtcagcac
ttgtgtgtggagaacgtcatgcatccacagtgctgccctggccactggggtccactgtgt
ctctcgtgtccaagctggtcaggaaagacctgcaacttcaatggagtctgtgtggacgga
gacgtcggcaacggcacctgcatctgtgatgagggtttctccgggtttgcttgtcaggac
tgtaaaaatccgaatgcatttgggaaaaagtgtgataaagtgtgtgactgcgtgcacgga
gtgtgtaacaaaggtcccgatggtgatggacagtgtttgtgtcagccgccatacactggg
aggcgctgtgaccaagtaagcagggggtgccgtggttgcagctccttctcgtactgcaaa
ggagaagaagaagaggcaggctgtgactgtttgcctgggtacaggaggatgaaggagaac
aagtgtttagtttcgtgctcacagagagactgcgacgtcaacgcccagtgctccacacag
gcctcaaatatcaaatgcacctgcaaaccagactatgagggtgacggcaagatctgcgtt
cctaaaaacccttgcttggagaacaacggaggctgtcccatcaactccaccgtttgtgtc
ttcaaaggacccaacaagtccagctgtgagtgcatgtttggcatgtcacctgtaggtggc
agccctgagtacggctgccagctcgtctctgcctgctcagctgacacctgcgaccccaca
gcagtctgccagaccgaactggatgggaaagccaggtgtttgtgcgacccgaggaagatt
ggagatggacggcgttgctacggtaacctgatggagcgcctcatcgagctggactcaaga
ggagaccacagagaaaatctgacaggagccgtcggcttgttcgagagaggctgttctctg
gtgctgagtcattctggacccttcacagctttcttcccgttgctgaaacaacctctgacc
ggtgttaatgaggaggtggtgtgtaaaaaccatctgatcctgggtcagcacctctacaaa
gctctggagggacgagatttaaacctttacggaggagagaagctgagagtcaaagtgaat
aagcatttcatcctgatgagcgatcccagcaggctgtacacaatcatccaatcagacctg
ccagcagctaacggcatcatccacatcatcgaccggccaatcaccaacagccttcctaac
gggccgcctcgggacgaacggtttgcggacaagacgatcggggagattctgagaaaagat
ggaaaatttaaccgcttcctgtctctggttgataactgtggttcccctcctcctctccat
ggagcaggacccctcaccgtgttcgtcccaaccaacgaggcggtggaccaagcccgagac
ggcagcatcctgtacatgttgaatgatgccaaagataaactccaagagctgctcagacac
catgttttctcccaggctgtgctgacagtggatgagttggccgccctttctcatgttcgg
acgatggccaatcagttggtcaccatctctgtttctgatgatggagagatcctgctgggg
gagaaaagggtccgtctagcgagcaccaacattatggcgtccaacggtgtcatccacatg
attgatgggctgctgtacccaccctccatcctgcccatcctgcctcaccgctgcgatgtc
atcaagagcaaagtcactgtgggtccttgtgttcactgcagttacctccacgagactcag
tgtcctgaaggcagcgtcgaaatggagagtcatcagatcggctgcgagtacgcaaacctt
cctttgggaccaacacacaacaaaggctgtgccaaatactgcaacgccaccaagcaggtg
gcagagtgctgcaaaggtttctacggtccagactgtaagccgtgcatcggaggattccag
catccctgctacgacaaaggaacatgtgttgatggtatccacggtaacggttcgtgcagc
tgtcactcgaatttcaaaggactcgcctgtcacatctgctcggatccgtccaaacatgga
gacaactgtgatgaagagtgtcgctgcgtgcacggcgtgtgcgataaccgtcccggcagc
ggcggagtgtgccggagaggatcgtgtttggagggattctccggagattattgtgacaag
aaggccacgtcctgcaacgtggacggcctgctggcccactgtcacatccacgcatactgt
acacacaccgggctggattacaagtgtttgtgcagggatggatataatggcgatggccac
tcctgttctcccataaacctctgcctgaagagcagccgcagaggctgcgacaccaacgca
gagtgtgtgtacgtgggtccaggtaatgtgtcgtgtgtgtgcaccgatggatggaccggt
gatgggaaagtctgcgtggaaatcaacaactgtcagctggaagaccgaggaggctgcagc
cccaacgccgactgcaaccacatcggaccgggacagagcgagtgtgtctgtaaaactggt
tatatgggagacgggaaggtgtgcgacctcatcaacccctgcctgacaaacaatggaggc
tgccataaactggccaagtgtgagctgaaggatgatggagtccaccactgctcctgtccg
gacggctacgctggggatggaaaccagtgcttcgggttcttactggatgagctggacatg
aacttacagctctacagtttcttcagactgattcagaagttcggacactcttctgaggat
ctgagcgggaatctcaccatcctggctccttcccgagaagccataatgatcatgagcaaa
gctgagaactctttctggaccacccggcaccgcctgcctcacttcctgcgggcccactac
ttactgggagtttactctgtggaagacctggacaatctgttgggacacaggctgcccact
ctgaacccctccaccaagtgggagatcaggaacgtcagtgggatgctctgcattggaaac
gcctccatcatcacccacaacctgcctgcgatcaacggctacatccacgtcataaaccag
gttctggcaccatcccgctcagaccttccacctgaacctcccactgtgatggcgttcctg
aactcctccagcttcagcctcttcagagagtacgctctgacatacaacctgtcagaacat
ctcggtggtctggattttactctcctgctgccgactgatgaggctgtcaggaaccacctt
agcagaacaaactcatcattcctggactcggatgtgtttcagtaccatgtgattcttaat
gagctgctgtttcccgaccacctgcatgacggcatgttgagaagcactctgctgggtccg
gactaccaggtccagttccatctgactgacaaaaaccagactgctgtgaatgatgttcct
ctcaacggcagttttattgagacgcagtacggcgtcgtcatcatcctccagcaggtcctc
aaagtgcgtcgcaacaggtgcagtcagcaggtctccctgcagtccaaaggaaggtgttcg
gactgtgatggacctcctcgatgcctctttaactacagtccaatcagggaacagtttcct
gccaacatgaagcccaactgtttttaccggaagcgggtcggacccagaaggacgtttgtg
ccaggctgcatcatcaattgccttcgtcacactatggatcactcctgttgccctggtttc
tacggccacgagtgctttaaatgccccggagacgacaggagcccatgctccaatcacggg
caatgccaggacggtaaccatggcaacggggagtgccaatgctacgagggtttccatggc
accgcctgtgaggactgtgagccgggacgctacggactcaactgctcctccaagtgttcc
tgcgaccacgggaagtgtgacgacgggctgacaggaagcggcaggtgtctgtgctacaaa
ggttggaaaggagcttcctgctctgtagagatcagaaatgacgcctgtggagatgtgtgt
gatgagaatgccaattgtgtaacaggaccacagggatcagctgctgtttgtgtttgcgcc
gctggttatgaaggaaatggaaccttctgccgagagctggatttgtgcagcaggtcaaac
ggtggatgctcagagtttgccgtctgtacaaaggtgtctcctggagagaggacctgtgcc
tgtaaaaagggttacactggagatggagtcgtctgtctggaaattgacggctgtctggtc
aacaacggaggctgccacacagcagcagaatgcatcagaaccggcccaaacgttacagcg
tgcagatgtcagaccggcttcgagggatcagggaggttttgctacccggtcaacccctgc
agaaccgacaacggcggctgcagtaaatacgctctctgcaaatacacgggtcagggccag
aggaactgcacctgccgcggaggccacgtgggggacggcttcaactgcaggggatccacc
aacatcgaggtgtacgggcagtcagagaacgatttctttcgcaaaatgctgttcatgtca
gagactcctggtctctatggcaacggacccttcaccatcttcgttcctctccaagaaacc
aacaatgaatccacaattaatgagtggaagagggctggccgtctggaacacatgattcgt
taccacattgtttcctgtgagattttgaccctaagtgacctcaaaactaccaagagtgtg
gtctctctgtcgggatactctctggagttcagtctgaaggagggttcagtctggatcaac
aacagatcgatggtggtgaagagcgactacaccaccagtaacggggtcatccaccacatc
gacacgctgctgacgccttacaggctgcaggataaaccgcagcttgaatctaaaacgatg
aacttcagtactgcagctacattttatggctacggacgcttttacaaactcattgaggat
gcagggttgcttccagtgctccagatgcccatccaccagcccttcaccatcttctggccc
actgacaaggccctcgactccctgccacgtgaaaggcaccactggctcgtcaatccggac
caccgggaccagctggctgctactgtcaaggcgcacatcatccgcaattccaggctgaca
ggtgtcggtcagcccaataaattaatgtcttaccggaccatgcatggatcaaccatcaag
ttaagctgtgacaagaagctggtggggtccgtgctgatcaatgagaacgcagctaggctg
gtggagcgctacatggcgttcaaagagggcctgggattcgggatcgaccagcttctggag
ccacctggactgggagcgttctgcgacagcgtgcagaataaaactacctttggccgctgt
gggacctgtttgttcccgccattttgccccctcaaacacgcagacacgggcaggacgatt
cgttgtttacggtatccctccagatatcgaaccagctactttggctggtatgacctggat
gatcgttttagcagaaaaagctgcaagagagtttgtcagtttccttcctgggtccagaag
tgctgcaaaaaccactacagcagagactgtcaggtgtgtccaggtggagttgaagatccc
tgcagcagccatggagactgtgatgatggtgttactggttcaggagcctgtaaatgccac
aaaggattcaaaggaaaagcctgtgacctctgtgccggcggttactacggtaccaactgt
acagcctgcagctgtgtgaaggggagctgcagcgatggcatggacgggaccggtcagtgt
gtctgtcagccgggttgggagggagatcgctgccagaacaagattggctcagtctctgag
aagtgccggcagtgccacgcccaggccatgtgtgtgtccggtgtcagctgtcagtgtaaa
cctggatttgagggcaacggtactttctgcagtccagttccacctccagacctctgctcc
gaatacaacggtggatgtgacctcaacgcagactgcaaccagagtgggctcatcgtcaac
tgcacctgccgcagtggttaccaaggagacggcttctcttgtgagccaatcaacagatgt
gttgaagagcagaacggtggctgcagtgactttgctgcctgcaagtttactggaccaaat
gagcgggagtgtgagtgcctgccagggtacgtgggtaatggagtccagtgtctagagaag
gtggagccccctgttaaccgctgcctggaggagaacggaggctgtaaccctgtcgccacc
tgcagtgatctacattaccatgccaacacagctggagtgttccacctgcgctccccagaa
gggaggtacaagatgaacttcacccaggcagacatcgcgtgccaggctgagggcgccacg
ctggctacgtttaaacagctgggagacgcccagcagctcgggatgcatctgtgtgtcgcc
ggctggatagaaggagggagggtgggatacccgacccgcttcccctcgaccaattgtggc
gacaaccatgtgggcttggttatgtacaaagatccagtggaccagaggagcaagtacgac
gcctactgctacaggctcaaagaagtttcatgttcgtgccctgaaggttatgttggaaac
ggtgacttctgcaacggggtcctgaccagcgtcctggcaacaaatggcaacttctccatc
ttctacaagctgctgttggactacagcggctcatcctctgacggccagcagctcatcaac
gtgttggatcacaggaagtccgaagtcaccctgtttgttcctcataactctggattcact
cagaaccagactctttctggacgagatctggagtaccacatctcaaccaatcacagcata
cgaccatataaggaactaaggcatcaggaagtgatctcatcaatgctggggttcaatctg
accgttacctatggcaacaacgagagctgtaaactggtgaaccagcggctgctgctggag
tgggacattcctgctgtgaacgggatcatccacgtcctcgaggcgccgctgacggccccc
gcgcccccggtgatccacagcagctccagaggccacgcccactccagtggcatcgtgtcg
gccatattggtttcattgttggcttgtgtgttggcggctctgggatactacctcttcagg
cacaagatggacgccttccgcttccactacttcaaaaatgaggatgaagatgctgctgca
ggtggaccaaccaaaccaacgctgatctccatcccaaatcctctgtacagcggctccagg
gccttcaccgagccgttcggggagacaagttcagcagcagaaccagctgagcctaaagaa
cctccaaacattctggacttggaccagtaa
DBGET
integrated database retrieval system
