Girardinichthys multiradiatus (darkedged splitfin): 124857015
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Entry
124857015 CDS
T08099
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmu01001
]
124857015
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124857015
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
124857015
Protein kinases [BR:
gmu01001
]
Serine/threonine kinases: Other
Other
124857015
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124857015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_EML_2
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
LisH
EIF3I
WD40_CDC20-Fz
WAPL
Motif
Other DBs
NCBI-GeneID:
124857015
NCBI-ProteinID:
XP_047204003
LinkDB
All DBs
Position
20:12778553..12806431
Genome browser
AA seq
1577 aa
AA seq
DB search
MSSQDEDPSAALSAVLSSAWTAALSADTAVAMSADAKADLAKLLDEWEVAHHGTTEQLVS
VLTKMSKLIEQETEGYYKADPDPFDDRHPGRADPNCMLGQLLKMLFLNDDFTNALLDTYI
MTNRDVTLNTAACRLLLNIVPGLDTAVVFEDKEGLVGKLFSWAREAERPLCVYAIGLLAR
AMSNQEVATSYREDNAQLVSVMIKRLHELQSDPTRHFKPIHAVQNLPQDTLDEPAQTSGV
TQTQQIQTEEEDAFEEERRKETNVGETSRSMPKAKCSAQRNSGGSSSSTRLLPNFVYQAS
PHPPSREKEDTQGGEEGGGGNRQTVKENGRKAKQKLHFTTSTGGSEEEAERSDPSEQPSG
GSSWSEISSILIGSDYRLSPLSPAMEQRLILQYLTPLGDYQELLAVFMKLDTRSLMMNYI
DLKKTKNVQLTFDALLYLASLLLHKKFASEFIAHGGVQKLLEIPRPSMAATGVSLCLYYL
AYNQDAMERVCMFPDGVLSDMVSYALWLLESSHASGVCHAIMFFSISFLFRAVLQLFDQL
DGLRRLVNLISTLEILNIENEASIMSDDQVFSSRQTAKHTCMALRRYFEAHLAVKTEQVK
QSLHTSESGTIIPQQPYYKAYSYTREQIIEMMEFLIECGPPQLHWEPVEVFYKLSCVPLM
LQLISAACDWKTYYGRSDTVRYALDILAILTVVPKVQLVLADTVEVLDEDRSPVPTVGMS
IILGVAEGEVFPNDAEIQKSALQVIINCVCAPDQSLNSVGAFAPLRQSLHPQQPPPTHNR
VLAHMWQVVQNNNGIKVLLSLLSVKVPITDADLIRALACKALVGLSRSSAIRQIISKLPL
FTSSHIQQLMKEPVLQDKRSEHIHFCRYAVKLTERVSGKPLIMGADVSLARLQKANVVAQ
TRITFSEKELLILIRNHLVAKGLHDTANTLVKEANLPAASLCPNSASCVTPASSISKSRT
CRLASGIAARVAANVGTSPLSSGNSASSAPSSSRSPAVPHLSGSWMSTSTVPTTPPHPAP
HGQSSHIVGRILFSRERTVASCNSGKKLRALKQKSDHGAFIQTPAMKKQLELHLPSPPSL
DSIITEYLREQHARCPNPVTTCPPFSLFNPHRCPESKQRRQASPNFTARLGSRVLYPKYG
GVDRGSLDRQLIFSRFRPMSVFHEGDGGDSSFTCCAFSACERFLMLGTCSGHLKLYNIFS
GDVEANYTCHGSAISHIEPSRDGNLVLTSASWSIPLSALWSMGGVFSMKNSFGEDHHVEF
SKLSQDRVIGTKDQVAHIYDIQTGEMVLTLNDPALANNYKRNCATFNPTDDLVLNDGVLW
DVRASRAIHKFDKFNMNFSGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNSN
GTIVYGAMLQADDEHDVMEQQVTSPFGSSFRTFDATDYKPIATLDVKRNIFDLCTDTKDY
YLAVIENQDAVSIDTVCRLYEVGRQKLAEEGDDDDQDEDQDDDDSSDTDDDDDDDDIDTD
PLIAELANNEEQENQDQANSPEDERIEALLGSSSGNDNISDSDDSDQEESDFNVTLFAEE
SDDDDSDMFGSMPDVWF
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccaagatgaagatccgtcggctgccctgtctgctgtcctgtcttctgcatgg
acagctgctttgtcggctgacacggctgttgccatgtccgcggacgccaaagccgatctc
gccaaactgttagacgagtgggaggtggcgcatcatggaaccacagagcaactggtgtcc
gtcttaaccaaaatgtctaagctgattgaacaggaaacagaagggtattataaagcggat
ccagatccctttgatgatcgtcatccaggacgagctgacccaaactgtatgctgggtcag
ctgctgaagatgctgtttttaaatgatgacttcactaatgcgcttttggacacgtatatc
atgaccaatcgagacgttaccctcaacacagcagcctgtcgcctccttctgaacattgtc
ccaggcctggatacagctgtcgtctttgaggataaggaaggtctggttgggaagttgttc
agctgggcccgtgaagccgagcggccgctgtgcgtctatgccattggcctgctggccaga
gccatgagcaaccaggaggtggcgactagctacagggaggacaacgctcagttggtatcc
gtgatgatcaaacgtctacacgagctgcaatctgatcccacgaggcactttaaacccatc
cacgctgtccagaatctacctcaagacactctggatgaacccgcccaaacctcaggtgtc
acacaaacacagcaaatccagacagaagaggaagatgcttttgaagaggagaggagaaaa
gaaacaaatgttggagaaaccagcagatcgatgccaaaggccaaatgttctgcccagaga
aacagtggtggtagcagcagctccactcgccttcttccaaactttgtgtatcaagcaagc
cctcatccaccttccagggagaaggaagacactcagggaggagaggaaggaggaggaggg
aatagacagactgtaaaggagaatgggaggaaggctaaacagaagctccattttactacc
tccactggtggtagtgaggaggaggcagagaggtctgatcccagcgagcagccgagcggc
ggctcatcctggtctgagataagctccattctgatcggctccgactaccggctgtcgcca
ctgagcccagccatggagcagaggctcatcctgcagtatctgacgccactcggagattac
caggagctgcttgcagtctttatgaaactggacactcggtcgctgatgatgaactacatc
gacctcaagaagaccaaaaatgttcagcttacctttgatgccctgctgtatctcgcctcg
ctgctccttcataagaagtttgcttccgagttcattgcccatggaggagtgcagaaactc
ctggagatcccaaggccttccatggcagcaacaggagtttctctctgcctctactacctg
gcttacaatcaggatgcaatggagagggtgtgcatgttcccagacggtgtgctgtcagac
atggtgtcctacgctctgtggttgctggagtcgtcccacgcctcaggcgtctgccacgcc
atcatgtttttttccatttcttttttattcagggcggtgttgcaactcttcgaccagctc
gatggtcttcgcaggctggtcaacctgatcagtactttggagatcctgaacatagagaat
gaggcgtcgataatgagtgacgaccaggtgttctctagccgacagacagccaagcacacc
tgcatggcactacgcaggtactttgaggctcacctggcagtgaagaccgaacaggtgaaa
cagtctttgcatacttcagaaagcggcaccatcattccccagcagccatactacaaggcc
tattcatataccagagagcaaataattgagatgatggagttccttatcgagtgtggacct
cctcagctccactgggagccagttgaagttttctacaagttgtcctgtgttcctttaatg
ctgcagctcatatccgcagcctgcgactggaagacctactacggcaggagcgacacagtt
cgctatgctttggacatcctggctatccttacagttgttcctaaagtccagctggtgctg
gctgatactgtggaagttctggatgaagataggtcccctgttcccactgtagggatgagc
atcattctgggtgttgctgaaggtgaagtgtttcctaacgatgctgaaattcagaagtct
gctttgcaagtgataataaactgcgtgtgcgctccagaccagagcctgaacagtgtcggc
gcttttgcccccctccgacagtctttgcacccccagcagccccctcccacccacaacaga
gtgctggcccacatgtggcaagtagtgcagaacaataatggtataaaggtgcttctgtct
ctgctgtcggtgaaggttcccatcacagacgcagacctgatccgcgctctggcctgcaag
gctctggttggactttctcgcagttctgccatcagacagatcatcagtaagctgccgctg
ttcaccagcagccacattcagcagctcatgaaggagccggtgctgcaggacaaacgcagc
gagcacatccacttctgtcgctacgccgtcaagctgaccgagcgagtgtctggcaagccc
ctcatcatgggcgctgacgtttcgctggctcgcctgcagaaggccaacgtggtcgcccag
actcgcatcacgttttctgaaaaggaactcctcattctgattaggaaccaccttgttgcc
aaaggactccatgacacagcaaataccctggttaaagaggcgaatctacctgcagcatct
ctctgtcctaattctgcctcatgtgtcacccctgcctcctccatttcaaaatctaggact
tgtcggttagccagtgggattgcggctcgtgttgctgccaatgttggaacctctcccttg
tcctcgggtaattcagcttcctctgctccttcttcctctcgttcacctgccgttcctcac
ttgtcaggttcctggatgtctacctcaactgttccgactactcctcctcatcctgcacct
catgggcagagctcgcatattgttggccggattttgttctctcgggaacgaacggtggcc
agctgcaactcagggaaaaaactgcgtgcacttaaacagaagtctgaccatggtgctttc
atacagaccccagctatgaaaaagcagctggagctccaccttccttctccgccgtccctt
gacagcatcatcacagagtacctgagggagcaacacgcacgctgtccgaatcctgtcacc
acctgcccacctttttcccttttcaaccctcaccgctgcccagagtccaaacagaggcga
caggcatcacccaacttcaccgctcgtctggggagtagagtgctgtatcccaaatatggg
ggtgtggacagaggaagtctggacagacagctgatattcagcaggtttcgccccatgtca
gttttccacgaaggcgatggcggcgatagcagtttcacctgttgtgccttttcagcctgc
gagcgtttcctgatgctgggaacctgctccggtcacctcaaactttacaacatcttctct
ggagatgtggaggccaactacacctgccatggatcggccatctctcacatcgagccttcc
cgggatggtaacttagttcttacctctgcttcctggagcatccctctgtcagctctgtgg
agtatgggcggtgtctttagcatgaagaactcctttggagaggatcaccatgttgagttc
agcaaactctctcaggacagagtaattggcacgaaggaccaggttgcacacatctacgac
atccagacgggtgagatggtcctgaccctgaacgaccccgcattggccaacaattacaag
aggaactgtgccacgttcaaccccactgacgacctggtgcttaatgatggggtgctgtgg
gatgtgcgggcatcacgggccatccacaagttcgacaagttcaacatgaacttcagcggg
gttttccatccaaatggcctggaggtcatcataaacacggagatttgggacctgaggacc
ttccacctgctccacactgttcctgctctggatcaatgcagggtggtctttaacagcaat
ggcaccatcgtgtatggagcgatgctgcaagctgatgatgagcatgacgtcatggagcaa
caggtgaccagtccatttggctcatctttcagaacctttgatgccacagactacaagcct
attgccacactggatgtaaagaggaacatctttgatctgtgtactgatactaaggactac
tacctggctgtcatagagaaccaagatgcagtaagcatagatactgtatgtcgtctttat
gaggttggacgacagaaactggcagaagaaggagacgacgatgatcaggatgaggatcag
gatgacgatgattcctcagacacagatgatgatgacgacgatgatgacatagatacagac
cccctcattgcggaactggcaaataatgaggaacaggagaaccaggatcaagcgaactcc
cctgaagatgagaggattgaggctcttcttggtagtagcagtggtaatgataacatcagt
gactctgatgattcagaccaagaagaatcagacttcaatgtgacattgtttgcagaagaa
tcagatgacgacgactccgacatgtttggatccatgcctgatgtctggttttaa
DBGET
integrated database retrieval system
