Girardinichthys multiradiatus (darkedged splitfin): 124857185
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Entry
124857185 CDS
T08099
Name
(RefSeq) WD repeat-containing protein 82-like
KO
K14962
COMPASS component SWD2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124857185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124857185
03036 Chromosome and associated proteins [BR:
gmu03036
]
124857185
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124857185
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
124857185
COMPASS/SET1 complex (yeast)
124857185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD_LRWD1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
124857185
NCBI-ProteinID:
XP_047204297
LinkDB
All DBs
Position
20:26037112..26042570
Genome browser
AA seq
315 aa
AA seq
DB search
MKITDSLLRSFKVARTYRLNSEKVNCVDYSSNGEHAVSSSNDDCIVLYDIQEGKPSSTLY
SKKYGVDLIRFTHGEAHTVIFSSNKLDDTIRYLSLTDNKFIRYFPGHTARVTALSMSPVD
ETFISSSLDKTIRIWDLRSPNCQGLTDPLGKPVCSFDPDGLVFAAGVESQAIKLYDIRAF
DKGPFACFEARLNRVCDWTGLKFSNDGKLILICTNGGAVRILNAFSGSVLHTFSGYNNSK
GISLEASFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGSINTLQFNPGYMTFAS
ACTNMSFWLPCIDDL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacagacagccttttgaggagttttaaagttgccaggacctatcgactgaat
tcagagaaagttaattgtgtggactacagctcaaatggtgaacatgcagtttcaagcagc
aacgacgactgtattgttttatatgacatccaggagggaaagccgtccagcaccctgtac
agcaagaagtacggagtagacctgatccgcttcacacatggggaggcccatactgtgatc
ttcagctccaacaaactggatgatacaattagatatctgtcgctcacggacaacaagttt
atccgatatttccctggtcacactgcaagggtaactgcactctctatgtctccggtggat
gagactttcatctctagttcgttggataagacgatccgcatctgggatctgcgttctccc
aactgtcaaggtttgactgaccctctgggaaaacctgtgtgttcatttgacccggatgga
ctggtttttgcagcaggagtggaatcacaggccatcaaactgtacgacattcgggccttt
gacaagggtccctttgcatgctttgaggccagattaaatcgggtctgtgactggactgga
ctgaaattcagtaacgacgggaagcttattctcatttgcaccaatggaggagctgttcgc
atcctgaatgccttcagtggatcggtgctgcacactttttcaggctataacaacagtaag
ggcatctccctggaggcctccttcaccccagactcacagtttgtcatgattggttcagag
gacggacgagttcatgtttggagcactgaaagtgggatgaaggtggccgtgctggacggc
aaacatccaggatccatcaacactctgcagtttaaccccggatacatgacatttgccagc
gcctgcacaaacatgtctttttggctcccgtgcattgatgacttatag
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integrated database retrieval system
